Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq753 141 2e-28 seq27769 123 5e-23 seq37552 120 6e-22 seq30531 104 5e-17 seq37601 96.9 7e-15 >seq753 Length=412 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| ||||| |||| ||| | || || || || || |||||||| || Sbjct 162 ACCACCACGCAGTCGAAGAACCAAATGCAGTGTTGACTCCTTCTGAATATTGTAGTCGGC 221 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || ||||| || | || || || ||||| || ||||| || || ||| || Sbjct 222 TAGTGTACGTCCATCTTCCAACTGCTTTCCAGCAAAAATTAAACGCTGCTGATCAGGAGG 281 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||| || ||||| || || || || |||||||||| || || ||| || Sbjct 282 GATACCCTCCTTATCCTGGATTTTAGCCTTCACATTATCGATAGTATCGCTAGATTCAAC 341 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | |||||| || || |||||||| Sbjct 342 ATCCAGGGTGATTGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 389 Score = 96.9 bits (106), Expect = 7e-15 Identities = 120/162 (74%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 282939 CGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCC 282998 || |||||||| || || || ||||||||||||| || || || || || ||||| Sbjct 1 CGACCATCCTCAAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGAGGGATACCT 60 Query 282999 TCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGC-TTCGACTTCGAG 283057 ||||| || || ||||| || || ||| |||| || || | || || ||| || || || Sbjct 61 TCCTTATCCTGAATCTTCGCCTTGACGTTATCAATTGTAT-CGCTGCTTTCTACATCAAG 119 Query 283058 AGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || |||||||| || | ||| ||||| || |||||||| Sbjct 120 CGTAATAGTCTTACCAGTAAGAGTTTTAACAAAGATCTGCAT 161 >seq27769 Length=1647 Score = 123 bits (136), Expect = 5e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| |||| || | || ||||| | || ||||| || || || |||||||| Sbjct 778 ACCACCTCGCAAACGTAAAACGAGATGAAGAGTTGACTCTTTCTGTATATTATAGTCAGC 837 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||||||||| || || ||||| || |||||||||| || || || || || Sbjct 838 AAGTGTGCGGCCATCTTCAAGCTGTTTACCAGCAAAGATCAGTCGCTGCTGATCGGGGGG 897 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||||||||| ||||| || || || |||| || || || | || || Sbjct 898 GATTCCTTCCTTGTCTTGTATCTTGGCCTTCACATTATCAATCGTATCACTGGACTCCAC 957 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| ||||| ||||| || || | ||||| || || || ||||| || Sbjct 958 ATCGAGGGTGATAGTCTTTCCAGTTAGTGTCTTCACAAAAATTTGCATGTT 1008 Score = 120 bits (132), Expect = 6e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||| || ||||| | || ||||| ||||||| |||||| || || ||| Sbjct 587 TCCTTTTGGATGTTATAATCAGCCAAAGTACGGCCGTCCTCTAATTGTTTACCTGCGAAG 646 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | || || || || || || || ||||| ||||| || || |||| || || Sbjct 647 ATTAGTCGCTGCTGATCTGGTGGTATGCCTTCCTTATCTTGTATTTTAACTTTCACATTA 706 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || ||||| || || ||||| || | ||||| |||||||| || | ||||| ||| Sbjct 707 TCTATAGTATCACTAGACTCGACATCCAACGTGATAGTCTTACCAGTGAGCGTCTTGACG 766 Query 283089 AATATCTGCAT 283099 ||||||||||| Sbjct 767 AATATCTGCAT 777 >seq37552 Length=3269 Score = 120 bits (132), Expect = 6e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || |||||||| || || || || || ||||| || ||||| || || || ||| Sbjct 3056 TCCTTCTGAATGTTGTAATCGGCCAGGGTACGTCCATCTTCCAGTTGCTTTCCAGCGAAG 3115 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||||||| || || ||| || || |||||||| || || ||||| || || || || Sbjct 3116 ATCAAACGCTGCTGATCAGGGGGGATGCCCTCCTTATCCTGAATCTTAGCCTTCACATTA 3175 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| || || | |||||| || | ||||| ||||| || || | |||||| || Sbjct 3176 TCGATGGTATCACTCGATTCGACATCCAAGGTGATTGTCTTTCCAGTGAGAGTCTTGACA 3235 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 3236 AAGATCTGCAT 3246 >seq30531 Length=1940 Score = 104 bits (114), Expect = 5e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || || ||||||||||| || || ||| || |||||||||||||| || Sbjct 799 CCACCTCGTAGACGCAGTACCAGATGCAAGGTAGATTCCTTCTGGATGTTGTAGTCCGCT 740 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| | || || ||||||||||||| ||| || || ||| ||| Sbjct 739 AGGGTGCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAGACGCTGCTGATCAGGGGGA 680 Query 282993 ATACC 282997 || || Sbjct 679 ATTCC 675 >seq37601 Length=3285 Score = 96.9 bits (106), Expect = 7e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||||||||| || || || || | ||||| |||||||||| || || Sbjct 1860 ATACCCTCCTTGTCTTGGATTTTAGCCTTGACATTGTCGATGGTGTCCGAAGACTCCACG 1801 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 || | || || ||||||||||| | ||||| ||||| |||||||| ||| Sbjct 1800 TCCAAGGTAATGGTCTTACCCGTTAGGGTCTTCACGAAAATCTGCATCTTC 1750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046142596273190