Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq100 109 8e-19 >seq100 Length=136161 Score = 109 bits (120), Expect = 8e-19 Identities = 165/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || | |||||||| || ||||||| ||| ||| | || |||| | | Sbjct 19175 AATGCAGATCTTCGTTAAGACACTCACTGGCAAAAATATCACTCTCGATGTTGAGCCTAC 19234 Query 124598 TGATACAATTTCTAAT---TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGA 124654 ||| || ||| ||| |||| | || ||| | ||||| |||| |||||| ||||| Sbjct 19235 TGAAACCATTC--AATCTCTTAAGGCT-AAGATTTAGGATAAGGAAGCTATACCTCCTGA 19291 Query 124655 TCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTA 124714 |||| || | || || || || || || || ||||| |||| || || | ||||| Sbjct 19292 TCAATAACGTCTCATCTTCGCTGGTAAGCAGTTAGAAGATAACCGTACTCTCTCTGATTA 19351 Query 124715 TAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 |||||| || || ||||| ||| | ||||| ||| | ||| | |||||||| Sbjct 19352 TAATATCCAGAAGGAATCCACTATTCATTTAGTTCTCCGTCTCAGAGGTGGT 19403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755453799734400