Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq228 116 3e-21 >seq228 Length=561775 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 |||||| || ||||| || || |||||||| ||| | ||||| | ||||||||||| Sbjct 22126 GTGGATGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGTTGTCCTCGAGCTG 22067 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| ||||| ||||| || ||||| ||| |||||||||| || || Sbjct 22066 CTTACCCGCGAAGATAAGACGTTGCTGGTCAGGAGGGATGGCCTCCTTGTCCTGGATCTT 22007 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || | | | || ||| || ||| |||||| |||| ||| | |||| ||||| Sbjct 22006 GGCCTTGAGCGACTGGATGGTTTCGGTGGGCTCGACGTCGAGGGTGATGTTTTTTCCGGT 21947 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| || || |||| ||| Sbjct 21946 GAGAGTTTTAACGAAGATCTACAT 21923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829168057236