Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq228 118 7e-22 >seq228 Length=561775 Score = 118 bits (130), Expect = 7e-22 Identities = 158/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||||| ||| |||| ||| || | |||||| || ||||| Sbjct 22113 TCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGTTGTCCTCGAGCTGCTTACCCGCGAAG 22054 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || || |||||||| || | | ||||||||| ||||| ||| || || Sbjct 22053 ATAAGACGTTGCTGGTCAGGAGGGATGGCCTCCTTGTCCTGGATCTTGGCCTT--GAGCG 21996 Query 34319 GCT--ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 || || | ||||| | |||||||| | |||||| |||| |||||||||||||| | Sbjct 21995 ACTGGATGGTTTCGGTGGGCTCGACGTCGAGGGTGATGTTTTTTCCGGTGAGAGTTTTAA 21936 Query 34377 CAAAGATCTGCATCGCTCGAATGGTGCGTGCGCAG 34411 | ||||||| ||| | |||||| |||| ||||| Sbjct 21935 CGAAGATCTACATTG-AGGAATGG-GCGTTCGCAG 21903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071082576480