Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq228 91.5 1e-13 >seq228 Length=561775 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 ||||| |||| | ||| | || | ||| || || ||||| || || ||||| || ||| Sbjct 22152 TGGCCTCCTCTGAGACGGAGTACGAGGTGGATGGTGGACTCCTTCTGGATGTTGTAGTCG 22093 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 | |||| ||| |||||||| ||||| || |||| ||||||||||| || ||| Sbjct 22092 GAGAGCGTGCGGTTGTCCTCGAGCTGCTTACCCGCGAAGATAAGACGTTGCTGGTCAGGA 22033 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || ||| | || ||||| ||| || || ||| | | || ||||||||||| Sbjct 22032 GGGATGGCCTCCTTGTCCTGGATCTTGGCCTTGAGCGACTGGATGGTTTCGGTGGGCTCG 21973 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || | ||| | | || ||||| | ||||| ||||| || | ||| Sbjct 21972 ACGTCGAGGGTGATGTTTTTTCCGGTGAGAGTTTTAACGAAGATCTACAT 21923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496062555213600