Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq100 132 1e-25 >seq100 Length=136161 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || | || |||| ||| | || ||||| ||||| |||||||| ||||| Sbjct 19402 CCACCTCTGAGACGGAGAACTAAATGAATAGTGGATTCCTTCTGGATATTATAATCAGAG 19343 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 ||||| | ||||||| || || ||||| || || || | | ||||||||||||| Sbjct 19342 AGAGTACGGTTATCTTCTAACTGCTTACCAGCGAAGATGAGACGTTATTGATCAGGAGGT 19283 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || |||| ||||||| |||||| || || | | || | ||| || |||| || || Sbjct 19282 ATAGCTTCCTTATCCTAAATCTTAGCCTTAAGAGATTGAATGGTTTCAGTAGGCTCAACA 19223 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || ||| | || ||||| ||||| || || || ||||||||| Sbjct 19222 TCGAGAGTGATATTTTTGCCAGTGAGTGTCTTAACGAAGATCTGCATT 19175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151394962715964