Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq228 114 1e-20 >seq228 Length=561775 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||| | || || ||||||||| | ||||| |||| |||| || || || || ||||| Sbjct 21923 ATGTAGATCTTCGTTAAAACTCTCACCGGAAAAAACATCACCCTCGACGTCGAGCCCACC 21982 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | | |||| || || || |||||||||| || || || || || Sbjct 21983 GAAACCATCCAGTCGCTCAAGGCCAAGATCCAGGACAAGGAGGCCATCCCTCCTGACCAG 22042 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| || || || || ||| | ||||| ||||||| ||||||| |||||| Sbjct 22043 CAACGTCTTATCTTCGCGGGTAAGCAGCTCGAGGACAACCGCACGCTCTCCGACTACAAC 22102 Query 22399 ATTCAAAAAGAATCCACCATACA 22421 || || || || |||||||| || Sbjct 22103 ATCCAGAAGGAGTCCACCATCCA 22125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726808103645