Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq100 96.9 8e-15 >seq100 Length=136161 Score = 96.9 bits (106), Expect = 8e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | || || | |||||| ||| ||| || ||||||||||| || | | Sbjct 19402 CCACCTCTGAGACGGAGAACTAAATGAATAGTGGATTCCTTCTGGATATTATAATCAGAG 19343 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| || || || |||||||| ||||| | |||| | || Sbjct 19342 AGAGTACGGTTATCTTCTAACTGCTTACCAGCGAAGATGAGACGTTATTGATCAGGAGGT 19283 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||| ||||||| || || || || | || || | || | | || || Sbjct 19282 ATAGCTTCCTTATCCTAAATCTTAGCCTTAAGAGATTGAATGGTTTCAGTAGGCTCAACA 19223 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||| | || || || || ||||| ||||| ||||||||| Sbjct 19222 TCGAGAGTGATATTTTTGCCAGTGAGTGTCTTAACGAAGATCTGCATT 19175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179650878362974