Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq228 91.5 3e-13 >seq228 Length=561775 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||||| || |||||||| |||| ||||||||| | | || | || Sbjct 22134 AGTACGAGGTGGATGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGTTGTCC 22075 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATT-CCTTCTCGCTC 199536 || |||||||| || |||||||| ||||| |||||||| ||| || ||| || | || Sbjct 22074 TCGAGCTGCTTACCCGCGAAGATAAGACGTTGCTGGTCAGGAGGGATGGCCTCCTTG-TC 22016 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| | || | || ||| || || | || || || | ||||| | Sbjct 22015 CTGGATCTTGGCCTTGAGCGACTGGATGGTTTCGGTGGGCTCGACGTCGAGGGTGATGTT 21956 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAAT 199623 || || ||||||||||| || || || Sbjct 21955 TTTTCCGGTGAGAGTTTTAACGAAGAT 21929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178918080550611