Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq228 129 7e-25 >seq228 Length=561775 Score = 129 bits (142), Expect = 7e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||||||||| | ||| | || || || | || |||||| ||||| ||||||||||| Sbjct 22150 GCCTCCTCTGAGACGGAGTACGAGGTGGATGGTGGACTCCTTCTGGATGTTGTAGTCGGA 22091 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 || ||||| | ||| ||||||||||| || ||||| || | || |||||||| | || Sbjct 22090 GAGCGTGCGGTTGTCCTCGAGCTGCTTACCCGCGAAGATAAGACGTTGCTGGTCAGGAGG 22031 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | | |||||||||| |||||| |||||||| | | || ||| | | || || Sbjct 22030 GATGGCCTCCTTGTCCTGGATCTTGGCCTTGAGCGACTGGATGGTTTCGGTGGGCTCGAC 21971 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || | |||||| |||| || || || |||||||| ||||| | |||| Sbjct 21970 GTCGAGGGTGATGTTTTTTCCGGTGAGAGTTTTAACGAAGATCTACATT 21922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236753743160