Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq228 145 8e-30 >seq228 Length=561775 Score = 145 bits (160), Expect = 8e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||| | || ||||| ||||| ||||| || |||| ||||||| ||||||||||| |||| Sbjct 21922 AATGTAGATCTTCGTTAAAACTCTCACCGGAAAAAACATCACCCTCGACGTCGAGCCCAC 21981 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | | || |||| || | || |||| ||||| |||| || || | ||||| Sbjct 21982 CGAAACCATCCAGTCGCTCAAGGCCAAGATCCAGGACAAGGAGGCCATCCCTCCTGACCA 22041 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || || || | |||||| || ||||| || ||| | ||||| ||| ||||||||| Sbjct 22042 GCAACGTCTTATCTTCGCGGGTAAGCAGCTCGAGGACAACCGCACGCTCTCCGACTACAA 22101 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| | || | || | || || ||| | ||||| |||| Sbjct 22102 CATCCAGAAGGAGTCCACCATCCACCTCGTACTCCGTCTCAGAGGAGGCC 22151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171343246720