Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq228 100 6e-16 >seq228 Length=561775 Score = 100 bits (110), Expect = 6e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | || ||||| | |||||||| || || || ||||| |||| || || Sbjct 22144 TCTGAGACGGAGTACGAGGTGGATGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGCGT 22085 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || |||||||||||||| ||||||||||| ||||| ||||| ||||| ||| | Sbjct 22084 GCGGTTGTCCTCGAGCTGCTTACCCGCGAAGATAAGACGTTGCTGGTCAGGAGGGATGGC 22025 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| || || || ||||| || ||||| || | || || || || Sbjct 22024 CTCCTTGTCCTGGATCTTGGCCTTGAGCGACTGGATGGTTTCGGTGGGCTCGACGTCGAG 21965 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 ||| | | ||||| || | |||||| ||||| Sbjct 21964 GGTGATGTTTTTTCCGGTGAGAGTTTTAACGAA 21932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109478287850711