Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq228 89.7 3e-13 >seq228 Length=561775 Score = 89.7 bits (98), Expect = 3e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||| || ||| || ||||| ||||| ||||| || || | || | || || ||||| Sbjct 22126 GTGGATGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGTTGTCCTCGAGCTG 22067 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || || || || || ||||||||||| | || | |||||||||| ||||| Sbjct 22066 CTTACCCGCGAAGATAAGACGTTGCTGGTCAGGAGGGATGGCCTCCTTGTCCTGGATCTT 22007 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 |||| || || | ||| || ||| || |||| ||| ||| ||||||| || Sbjct 22006 GGCCTTGAGCGACTGGATGGTTTCGGTGGGCTCGACGTCGAGGGTGATGTTTTTTCCGGT 21947 Query 34958 GAGAGTCTTCACAAAGATCTGCAT 34981 |||||| || || ||||||| ||| Sbjct 21946 GAGAGTTTTAACGAAGATCTACAT 21923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632678142024