Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq100 100 2e-16 >seq100 Length=136161 Score = 100 bits (110), Expect = 2e-16 Identities = 163/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 101238 CATTTC--CTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTA 101295 |||||| | ||||| | ||| | ||||||||||| || ||||| || || ||||| || Sbjct 19409 CATTTCACCACCTCTGAGACGGAGAACTAAATGAATAGTGGATTCCTTCTGGATATTATA 19350 Query 101296 ATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATC 101355 ||| | || ||| | | ||| || || |||||||| || || || | ||| | |||||| Sbjct 19349 ATCAGAGAGAGTACGGTTATCTTCTAACTGCTTACCAGCGAAGATGAGACGTTATTGATC 19290 Query 101356 GGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGT 101415 || || || |||| ||||| | ||| || || | | || | || |||| | Sbjct 19289 AGGAGGTATAGCTTCCTTATCCTAAATCTTAGCCTTAAGAGATTGAATGGTTTCAGTAGG 19230 Query 101416 TTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || ||||||| ||||||| || | || || || || |||||||| Sbjct 19229 CTCAACATCGAGAGTGATATTTTTGCCAGTGAGTGTCTTAACGAAGATCTGCAT 19176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396277274693181