Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq100 98.7 2e-15 >seq100 Length=136161 Score = 98.7 bits (108), Expect = 2e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| ||||| | |||||||| | ||| | || || ||||||||||||||| Sbjct 19403 ACCACCTCTGAGACGGAGAACTAAATGAATAGTGGATTCCTTCTGGATATTATAATCAGA 19344 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | || || | ||| || || || |||||||| ||||| | | | ||||||||| || Sbjct 19343 GAGAGTACGGTTATCTTCTAACTGCTTACCAGCGAAGATGAGACGTTATTGATCAGGAGG 19284 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 ||| |||| ||||| | || ||| || | | || | || | | || || Sbjct 19283 TATAGCTTCCTTATCCTAAATCTTAGCCTTAAGAGATTGAATGGTTTCAGTAGGCTCAAC 19224 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || ||||| || |||| ||||| | ||| |||| || ||||||||| Sbjct 19223 ATCGAGAGTGATATTTTTGCCAGTGAGTGTCTTAACGAAGATCTGCATT 19175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984477061019550