Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq100 100 4e-16 >seq100 Length=136161 Score = 100 bits (110), Expect = 4e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || ||| | || || |||| || ||| | ||||| || | || | Sbjct 19177 TGCAGATCTTCGTTAAGACACTCACTGGCAAAAATATCACTCTCGATGTTGAGCCTACTG 19236 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || |||||| | | || ||| || | ||| |||| || || || |||||| Sbjct 19237 AAACCATTCAATCTCTTAAGGCTAAGATTTAGGATAAGGAAGCTATACCTCCTGATCAAT 19296 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | ||||| || || ||||| || ||||| ||||| | || | | |||||||||| Sbjct 19297 AACGTCTCATCTTCGCTGGTAAGCAGTTAGAAGATAACCGTACTCTCTCTGATTATAATA 19356 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAA 146261 | || || ||||| ||||| |||||||| | || | ||||| ||| || Sbjct 19357 TCCAGAAGGAATCCACTATTCATTTAGTTCTCCGTCTCAGAGGTGGTGAA 19406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786164110290360