Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq100 152 1e-31 >seq100 Length=136161 Score = 152 bits (168), Expect = 1e-31 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| ||||| | ||| |||||||| || | ||| ||||| ||||| |||||||||||||| Sbjct 19403 ACCACCTCTGAGACGGAGAACTAAATGAATAGTGGATTCCTTCTGGATATTATAATCAGA 19344 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 ||| | | ||||||| || || ||||| ||||| || | || |||||| ||||| Sbjct 19343 GAGAGTACGGTTATCTTCTAACTGCTTACCAGCGAAGATGAGACGTTATTGATCAGGAGG 19284 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 ||| |||||||||| | |||||| || || | | || ||| || ||| |||| || || Sbjct 19283 TATAGCTTCCTTATCCTAAATCTTAGCCTTAAGAGATTGAATGGTTTCAGTAGGCTCAAC 19224 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || | ||| || | ||||| || | ||||| || || ||||||||| Sbjct 19223 ATCGAGAGTGATATTTTTGCCAGTGAGTGTCTTAACGAAGATCTGCATT 19175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981824268938987