Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq43 120 7e-22 >seq43 Length=317374 Score = 120 bits (132), Expect = 7e-22 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 305293 TGATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATC 305352 |||||||||| ||||||||| || ||| | ||| |||| ||| | ||||||| Sbjct 217369 TGATATTGTTCATAGACATTTGTTGGAAGGTGACTATGTTATGTTTAATCGTTAACCATC 217310 Query 305353 ACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCG 305412 || |||||||||||| | ||| |||| || ||||||||| | | |||||| | Sbjct 217309 TCTTCATAAAATGTCTTTTATGAGTCATCGTGTAAAAGTATTACCATACTCTACATTTAG 217250 Query 305413 ATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATAT 305472 ||||| | ||||| | || |||||||| ||||||||||||||||| |||||||| Sbjct 217249 GCTAAATTTGTGTGCTGCAAAACCGTATAATGCTGATTTTGATGGAGATGAGATGAATAT 217190 Query 305473 GCATGTACC 305481 ||||| ||| Sbjct 217189 GCATGAACC 217181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186809256992913