Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq228 118 1e-21 >seq228 Length=561775 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||||||||| || | |||||||| | ||||| ||||| || |||||||||||| Sbjct 22149 CCTCCTCTGAGACGGAGTACGAGGTGGATGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 22090 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| || || || || || | ||| ||||| || || || Sbjct 22089 AGCGTGCGGTTGTCCTCGAGCTGCTTACCCGCGAAGATAAGACGTTGCTGGTCAGGAGGG 22030 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||| | || || || || || || |||| || | | || |||| | || ||| Sbjct 22029 ATGGCCTCCTTGTCCTGGATCTTGGCCTTGAGCGACTGGATGGTTTCGGTGGGCTCGACG 21970 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| || ||| |||| ||||| | |||||||||||| || | |||| Sbjct 21969 TCGAGGGTGATGTTTTTTCCGGTGAGAGTTTTAACGAAGATCTACATT 21922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396928027160