Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq100 91.5 1e-13 >seq100 Length=136161 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| |||||||| || ||||| || |||| ||||||||||| ||||| | || Sbjct 19175 AATGCAGATCTTCGTTAAGACACTCACTGGCAAAAATATCACTCTCGATGTTGAGCCTAC 19234 Query 23670 GGACACTGTTGAA-ATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || || || | |||| | || ||| || || |||| | |||| || |||| Sbjct 19235 TGAAACCATTCAATCTCTTAAGGC-TAAGATTTAGGATAAGGAAGCTATACCTCCTGATC 19293 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 || | ||| | || || || || || || | ||||| | || ||| | ||||| | Sbjct 19294 AATAACGTCTCATCTTCGCTGGTAAGCAGTTAGAAGATAACCGTACTCTCTCTGATTATA 19353 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTT 23820 | || || || || ||||| | ||||||||| Sbjct 19354 ATATCCAGAAGGAATCCACTATTCATTTAGTT 19385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008640158364