Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq582 86.0 5e-12 >seq582 Length=225330 Score = 86.0 bits (94), Expect = 5e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 45182 TCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTG 45241 || |||| ||||||||| || |||||||| |||||||| || ||||| | || ||||| Sbjct 127296 TCCTCCAATTGTTTTCCTGCAAATATCAAACGCTGTTGATCAGGAGGAATTCCTTCCTTA 127237 Query 45242 TCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATC 45301 ||| || || ||| || || | | || || ||| ||||| | ||||| Sbjct 127236 TCCTGGATCTTAGCCTTGACGTCCTCAATGCGATCTGTGGGCTCGACCTCAAGCGTAATA 127177 Query 45302 GTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| || |||||||||||||| ||||||||||| Sbjct 127176 TGCTTTCCGGTCAGAGTCTTCACGAAGATTTGCAT 127142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395068073831080