Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq989 89.7 7e-13 >seq989 Length=40357 Score = 89.7 bits (98), Expect = 7e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 73930 ATGGAGATATACTAGTGCTAAATAGACAACCTACTTTACATAAAGCATCAATGATGGCTC 73989 |||||||| || | || | || ||||||||| | || |||||| |||||||||| || Sbjct 3611 ATGGAGATGTAGTTGTATTTAACAGACAACCTTCATTGCATAAAATGTCAATGATGGGTC 3670 Query 73990 TTCGAGTTAAAATTATGGATGTAAAAACCTTTAAATTTAATCTTGCATGCACTAAACCAT 74049 || | | || || || | || ||| ||| ||| | || |||| |||| Sbjct 3671 ATCATGCCATTATATTGCCTGGATCGACATTTCGATTAAATTTATCAGTAACTACTCCAT 3730 Query 74050 ATAATGCAGATTTTGATGGAGATGAAATGAATGCTCATGCGCCTCAATC 74098 | || ||||||||||||||||||||||||||| |||| |||||||| Sbjct 3731 ACAACGCAGATTTTGATGGAGATGAAATGAATATGCATGTTCCTCAATC 3779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679801823433600