Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq859 95.1 3e-14 >seq859 Length=53549 Score = 95.1 bits (104), Expect = 3e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 27239 AAGGCGCAATTGTTATTGATGCAAAATCGGGGTTTTATACGGATCCAGTCGCCACACTTG 27298 |||| || | ||||||||| ||||| | || | |||||| ||| || | || || | Sbjct 33708 AAGGTGCTACTGTTATTGAACCAAAAGCAGGATATTATACAACACCAATCCCAACTCTGG 33767 Query 27299 ACTTTGCATCACTATATCCATCAATTATGCTTGCTCACAATTTATGTTACTCAACCTTTG 27358 | |||||||| ||||||||||| |||||| |||| ||||| ||||| || ||||| ||| Sbjct 33768 ATTTTGCATCTCTATATCCATCTATTATGATTGCACACAACTTATGCTATTCAACACTTG 33827 Query 27359 TT 27360 || Sbjct 33828 TT 33829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303328885157360