Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq187 167 4e-36 seq422 159 6e-34 seq1024 156 8e-33 seq827 152 9e-32 seq959 145 1e-29 seq788 145 1e-29 seq785 143 5e-29 seq548 143 5e-29 seq393 141 2e-28 seq576 140 6e-28 seq1149 134 3e-26 seq639 109 1e-18 seq710 98.7 2e-15 >seq187 Length=9559 Score = 167 bits (184), Expect = 4e-36 Identities = 180/237 (76%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 ||||| || || || || || | |||||||| || || || |||||||||||| | Sbjct 4673 TTTAAAAACCACCACGGAGACGAAGAACCAAGTGAAGGGTTGAGTCTTTTTGGATGGAGT 4614 Query 68287 AATC--GGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTG 68344 | || | || |||| | |||||||| | ||||| |||||||| || || | |||||| Sbjct 4613 AGTCTTGAAGGGTGT--TTCCATCTTCGAGTTGCTTACCGGCGAAGATAAGACGTTGTTG 4556 Query 68345 GTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGC 68404 || ||||| || |||||||||||||| ||||| || |||||| ||||||| ||||| Sbjct 4555 ATCTGGTGGGATACCTTCCTTGTCTTGGATCTTNGCTTTGACGTCCTCGATACGGTCTGT 4496 Query 68405 TGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||| ||||| | |||||| ||||| |||||||| |||||||| || ||||| Sbjct 4495 TGGTTCGACTTCAAGNGTGATGTGCTTTCCTGTGAGGGTTTTGACGAAGATTTGCAT 4439 Score = 147 bits (162), Expect = 4e-30 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATC--GG 68292 || || ||||| || | || | ||| || || || || ||||||||| || || || Sbjct 4437 CCACCACGAAGACGAAGGACAAGGTGAAGTGTAGAGTCCTTTTGGATGGAGTAGTCTTGG 4378 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 || |||| | || ||||| | ||||| |||||||| || || | |||||| || |||| Sbjct 4377 AGGGTGT--TGCCGTCTTCGAGTTGCTTACCGGCGAAGATAAGACGTTGTTGATCTGGTG 4320 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || |||||||||||||| ||||| || |||||| ||||||| ||||| || ||| | Sbjct 4319 GGATACCTTCCTTGTCTTGGATCTTAGCTTTGACGTCCTCGATACGGTCTGTTGGTTCGA 4260 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| | ||||||| || || || |||||||| || || || ||||| Sbjct 4259 CTTCGAGGGTGATGTGCTTGCCTGTAAGGGTCTTAACAAAGATTTGCAT 4211 >seq422 Length=116156 Score = 159 bits (176), Expect = 6e-34 Identities = 448/686 (65%), Gaps = 15/686 (2%) Strand=Plus/Minus Query 268271 ACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCAT 268330 ||||| || |||||||||||| || | || ||| | ||| ||||| | | Sbjct 92096 ACATAATCTTTCGCATGGCCCCAGTCTCTTTTAGCGCTTAGGTTTCCGAGCATTATTTCG 92037 Query 268331 TTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGTC 268390 || |||| ||||| | |||| | |||| ||||| || | |||||| || || Sbjct 92036 TTTTGCTGACCGAGAAGGATCTTCGCAACAGCGCGGGTGATCTTCCTGGTCACAAATGTT 91977 Query 268391 TCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATAT 268450 || || || || || || |||||||| | |||||||| | || ||| |||||| Sbjct 91976 TCACCGCGAAGCGGAGATTCATGGTTGAACAAAATGCCGTTAGATGCATGCATTCCATAT 91917 Query 268451 GCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAA 268510 || || || ||||| || |||| || ||| | | ||| || ||||| || || Sbjct 91916 GCTTCTCGATAGTTTACTGTGATCCAATAAGCATAAAGCTTGGCGCAGGCGTAAGGCGAT 91857 Query 268511 CGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAGCTCG 268570 | ||||| ||| || || || ||| || || | |||| ||||| || |||| || Sbjct 91856 CTTGGATAGAATGGAGTTGTTTCCTTCTGTGGAACTTCTTGGACTAAACCGTAGAGTTCT 91797 Query 268571 GAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGATTCGGATTGCCTCG 268630 || || || || || || || |||| | | || || | | || ||| ||||| Sbjct 91796 GATGTTGAAGCCTGATAAAATCGTGTTTTGTGAGTAAGGCCTAATAATCTGATGGCCTCC 91737 Query 268631 AGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTCGAATGAC 268690 | | ||||| ||||| ||||| || ||| ||||| || || || | ||||| || Sbjct 91736 AATATTCGAAGGGTTCCTATGCCGTCAGCGTTGGCTGTGTATTCGGGGGTGTCGAAGGAA 91677 Query 268691 ACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCTGCTGCACG 268750 || | |||||||||| || | ||||| || | || || || | ||| || | Sbjct 91676 ACTTTGACATGGCTCATAGCAGCGAGGTTGTAGATTTCGTCTGGCTGGACAGCTTGGATA 91617 Query 268751 ATCTTCACGAGGTT-----CGTTGAGTCGGTGAGGTCTCCGTAGTGCAACACAAGCTGCC 268805 || ||||||| | | |||||||| || || |||||||| | | || | Sbjct 91616 AT-----CGAGGTTAAGGACATCGAGTCGGTAAGATCGCCGTAGTGGAGGATGAG-TCGT 91563 Query 268806 CTGACTCGGAGTACTTG----TCGTACAGTGCATCAATTCGCTGGGTATTCAGTTGCGAA 268861 || || || | || | ||||| || ||| || || | ||| || | | ||| Sbjct 91562 CTCTCTTCGATTTCTGGACCTTCGTAAAGGTGATCGATACGATCGGTGTTGAAAAGTGAA 91503 Query 268862 GAGCGCCGTTTGATTCCATGAACGACGTACCCAATGTTGATGAGGAATTCTGCAAGGTAA 268921 | ||| ||||| ||||||||||||||||| |||| |||||||| | || ||||| || Sbjct 91502 GCGCGGCGTTTAATTCCATGAACGACGTAGCCAAGTTTGATGAGATACTCAGCAAGATAG 91443 Query 268922 GAGCCATCTTGCCCCGTGATTCCCGT 268947 | ||||| || || ||||| || || Sbjct 91442 GCTCCATCCTGGCCAGTGATACCGGT 91417 >seq1024 Length=37034 Score = 156 bits (172), Expect = 8e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATC--GG 68292 || || ||||| || | |||||||| || || || || ||||||||| || || || Sbjct 16933 CCACCACGAAGACGGAGAACCAAGTGGAGGGTTGAGTCCTTTTGGATGGAGTAGTCTTGG 16992 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 || |||| | ||||||||||| || || || || || ||||| | |||||| || |||| Sbjct 16993 AGGGTGT--TTCCATCTTCTAATTGTTTACCAGCAAAAATGAGACGTTGTTGATCTGGTG 17050 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| ||||| |||||||| || || |||||||| | ||||| |||| || ||| | Sbjct 17051 GAATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATCTTCGATACGATCTGTTGGTTCGA 17110 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| | ||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct 17111 CTTCAAGGGTGATGTGCTTTCCTGTGAGTGTCTTAACGAAGATTTGCAT 17159 Score = 156 bits (172), Expect = 8e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATC--GG 68292 || || ||||| || | |||||||| || || || || ||||||||| || || || Sbjct 17161 CCACCACGAAGACGGAGAACCAAGTGGAGGGTTGAGTCCTTTTGGATGGAGTAGTCTTGG 17220 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 || |||| | ||||||||||| || || || || || ||||| | |||||| || |||| Sbjct 17221 AGGGTGT--TTCCATCTTCTAATTGTTTACCAGCAAAAATGAGACGTTGTTGATCTGGTG 17278 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| ||||| |||||||| || || |||||||| | ||||| |||| || ||| | Sbjct 17279 GAATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATCTTCGATACGATCTGTTGGTTCGA 17338 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| | ||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct 17339 CTTCAAGGGTGATGTGCTTTCCTGTGAGTGTCTTAACGAAGATTTGCAT 17387 >seq827 Length=184754 Score = 152 bits (168), Expect = 9e-32 Identities = 174/232 (75%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 68232 TTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATC- 68290 || || || || || || | || | ||| || || || ||||||||||| ||||| Sbjct 149083 TTACCACCACGGAGACGAAGCACAAGGTGGAGAGTTGAATCTTTTTGGATTGAGTAATCT 149024 Query 68291 -GGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGG 68349 |||| |||| | || ||||| || || || |||||||| || | | |||||| || | Sbjct 149023 TGGAGGGTGT--TTCCGTCTTCCAATTGTTTTCCGGCGAAGATCAAACGTTGTTGATCTG 148966 Query 68350 GTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATT 68409 ||||||| |||||||||||||| || || ||||||||| ||||||| |||||| || || Sbjct 148965 GTGGAATTCCTTCCTTGTCTTGGATTTTGGCCTTGACGTCCTCGATTCTGTCTGTTGGTT 148906 Query 68410 CTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||| |||||| || || || || ||||| || || |||||||| Sbjct 148905 CAACTTCCAGAGTGATGTGCTTCCCAGTCAGCGTCTTCACAAAGATCTGCAT 148854 >seq959 Length=42966 Score = 145 bits (160), Expect = 1e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || || || || || ||||| || || | Sbjct 25504 CCACCACGAAGACGGAGAACGAGGTGAAGTGTTGAGTCCTTCTGGATTGAGTAGTCTTGG 25445 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | || |||||||| || || |||||||| ||||| | |||||| ||||||||| Sbjct 25444 AGTGTATTTCCGTCTTCTAATTGTTTACCGGCGAAGATGAGACGTTGTTGATCGGGTGGA 25385 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| |||||||| || || || ||||| | ||||| ||| | || ||| ||| Sbjct 25384 ATTCCTTCTTTGTCTTGGATTTTGGCTTTGACATCTTCGATACGGTCGGTTGGTTCGACT 25325 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | |||||| ||||| ||||| ||||||||||| || |||||| Sbjct 25324 TCGAGTGTGATGTGCTTTCCAGTGAGTGTCTTGACGAAAATTTGCATT 25277 >seq788 Length=62525 Score = 145 bits (160), Expect = 1e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || || || || || ||||| ||| || Sbjct 15132 CCACCACGAAGACGGAGGACGAGGTGAAGTGTTGAGTCCTTCTGGATTGAATAGTCTTGA 15191 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | |||||||| | ||||| || ||||| ||||| | |||||| || ||||| Sbjct 15192 AGTGTGTTTCCATCTTCGAGTTGCTTGCCAGCGAAGATGAGACGTTGTTGATCTGGTGGG 15251 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||||||||| ||||| ||||||||| | ||||| || | || ||| ||| Sbjct 15252 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACGTCTTCGATACGATCAGTTGGTTCGACT 15311 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | |||||| ||| || ||||| ||||||||||| || |||||| Sbjct 15312 TCGAGTGTGATGTGTTTGCCGGTGAGTGTCTTGACGAAAATTTGCATT 15359 >seq785 Length=62999 Score = 143 bits (158), Expect = 5e-29 Identities = 172/232 (74%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 68232 TTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATC- 68290 || || || || || || | || | ||| || || || ||||||||||| || || Sbjct 32640 TTACCGCCACGGAGACGAAGCACAAGGTGGAGAGTTGAATCTTTTTGGATTGAGTAGTCT 32581 Query 68291 -GGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGG 68349 |||| |||| | |||||||| || || || |||||||| || | | |||||| || | Sbjct 32580 TGGAGGGTGT--TTCCATCTTCCAATTGTTTTCCGGCGAAAATCAAACGTTGTTGATCTG 32523 Query 68350 GTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATT 68409 ||||||| ||||| |||||||| || || ||||||||| ||||||| |||||| || || Sbjct 32522 GTGGAATTCCTTCTTTGTCTTGGATTTTGGCCTTGACGTCCTCGATTCTGTCTGTTGGTT 32463 Query 68410 CTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||| || ||| || || || || ||||| || || |||||||| Sbjct 32462 CAACTTCCAGAGTAATGTGCTTCCCTGTCAGTGTCTTCACAAAGATCTGCAT 32411 >seq548 Length=109954 Score = 143 bits (158), Expect = 5e-29 Identities = 172/232 (74%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 68232 TTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATC- 68290 || || || || || || | || | ||| || || || || ||||| || ||||| Sbjct 39702 TTACCACCACGGAGACGAAGCACAAGGTGGAGAGTTGAATCCTTTTGAATTGAGTAATCT 39761 Query 68291 -GGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGG 68349 |||| |||| | || ||||| || || || || ||||| || | | |||||| || | Sbjct 39762 TGGAGGGTGT--TGCCGTCTTCCAATTGTTTTCCAGCGAAGATCAAACGTTGTTGATCTG 39819 Query 68350 GTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATT 68409 ||||||| |||||||||||||| || || ||||||||| |||||||| |||||| || || Sbjct 39820 GTGGAATTCCTTCCTTGTCTTGGATTTTGGCCTTGACGTCCTCGATGCTGTCTGTTGGTT 39879 Query 68410 CTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||| || ||| || || || || ||||| ||||| |||||||| Sbjct 39880 CAACTTCCAGAGTAATGTGCTTCCCTGTCAGCGTCTTTACGAAGATCTGCAT 39931 >seq393 Length=120711 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | || | ||| || || || || ||||| || ||||| | Sbjct 67609 CCACCACGAAGGCGGAGAACGAGGTGAAGGGTTGAGTCCTTTTGAATTGAGTAATCTTGG 67550 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | || |||||||| ||||| |||||||| ||||| | |||||| || |||||| Sbjct 67549 AGTGTGTTTCCGTCTTCTAATTGCTTACCGGCGAAGATGAGACGTTGTTGATCTGGTGGA 67490 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| |||||||||||||| || || ||| | ||||| || | || || ||| Sbjct 67489 ATTCCTTCTTTGTCTTGAATCTTAGCTTTAACGTCTTCGATACGATCGGTTGGCTCGACT 67430 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | || || ||||| || || ||||||||||| || |||||| Sbjct 67429 TCGAGTGTAATATGCTTTCCTGTAAGTGTCTTGACGAAGATTTGCATT 67382 >seq576 Length=101662 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || ||||| || || || || ||||| ||| || || Sbjct 65627 CCGCCACGAAGACGAAGGACTAAGTGAAGTGTAGAGTCCTTTTGAATGGAGTAGTCCTGA 65686 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | || ||||| | ||||| |||||||| || | | |||||||| |||||| Sbjct 65687 AGTGTGTTTCCGTCTTCGAGTTGCTTTCCGGCGAAGATTAAACGCTGTTGGTCTGGTGGA 65746 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| || |||||| ||||||| |||| || ||| ||| Sbjct 65747 ATTCCCTCCTTGTCTTGGATCTTGGCTTTGACGTCCTCGATACGATCTGTTGGTTCGACT 65806 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| |||||| || || ||||| ||||| || ||||| Sbjct 65807 TCAAGTGTGATGTGTTTTCCAGTAAGAGTCTTTACGAAGATTTGCAT 65853 Score = 120 bits (132), Expect = 6e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATC--GG 68292 || || ||||| || | |||||||| || || || || ||||||||| ||||| | Sbjct 65399 CCGCCACGAAGACGGAGAACCAAGTGGAGGGTTGAATCCTTTTGGATGGAGTAATCTTGA 65458 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 || |||| | || ||||| || || || || || || || | | ||||| || |||| Sbjct 65459 AGGGTGT--TTCCGTCTTCCAATTGTTTGCCAGCAAAAATCAAACGCTGTTGATCTGGTG 65516 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| || |||||||||||||| || ||||| || | || || |||| | || || | Sbjct 65517 GAATTCCCTCCTTGTCTTGAATTTTGGCCTTAACATCTTCAATTCTGTCAGTTGGCTCGA 65576 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| | || ||| || || || |||||||| ||||| |||||||| Sbjct 65577 CTTCAAGTGTAATGTGCTTGCCAGTAAGGGTCTTTACGAAAATCTGCAT 65625 >seq1149 Length=154106 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || ||||| ||||| ||||| ||| || ||||| | || ||||| | || Sbjct 59781 GTGAAGTGTGGAATCTTTCTGGATTGAATAGTCTTGAAGTGTGTTTCCGTCTTCGAGTTG 59722 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| |||||||| || || | |||||| || |||||||| || ||||||||||| ||||| Sbjct 59721 CTTTCCGGCGAAAATAAGACGTTGTTGATCTGGTGGAATTCCCTCCTTGTCTTGGATCTT 59662 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 || || ||| | || || |||| || ||| ||||| | ||||||| ||||| || Sbjct 59661 GGCTTTCACGTCTTCAATACGATCTGTTGGTTCGACTTCGAGGGTGATGTGCTTTCCAGT 59602 Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461 |||||||| ||||| || ||||| Sbjct 59601 AAGGGTCTTTACGAAGATTTGCAT 59578 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | || ||||| || || || || ||||| ||| || || Sbjct 60032 CCACCACGAAGGCGAAGAACTAAGTGGAGGGTTGAATCCTTTTGAATGGAGTAGTCTTGA 59973 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | || ||||| | ||||| |||||||| || || | |||||| || |||||| Sbjct 59972 AGTGTGTTTCCGTCTTCGAGTTGCTTTCCGGCGAAAATAAGACGTTGTTGATCTGGTGGA 59913 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| || || ||| | || || |||| || ||| ||| Sbjct 59912 ATTCCCTCCTTGTCTTGGATCTTGGCTTTCACGTCTTCAATACGATCTGTTGGTTCGACT 59853 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||| |||||| || | || || ||||| |||||||| Sbjct 59852 TCGAGGGTGATGTGTTTTCCAGTCAATGTTTTCACGAAAATCTGCAT 59806 >seq639 Length=86550 Score = 109 bits (120), Expect = 1e-18 Identities = 152/210 (72%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATC--GGAGAGTGTCCTCCCATCTTC 68311 |||| || || || || ||||||||||| || || |||| |||| | ||||| || Sbjct 86318 CAAGATGGAGAGTCGAGTCTTTTTGGATTGAGTAGTCTTGGAGGGTGT--TTCCATCCTC 86261 Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371 ||| || || || || ||||| | | ||||| || || ||||| ||||||||||| || Sbjct 86260 TAATTGTTTTCCTGCAAATATCAAACGCTGTTGATCAGGGGGAATTCCTTCCTTGTCCTG 86201 Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431 ||||| ||||||||| |||| ||| |||| || || ||||| | || ||| || Sbjct 86200 GATCTTAGCCTTGACGTCCTCAATGCGATCTGTTGGCTCGACTTCAAGCGTAATGTGCTT 86141 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || ||||| || || || ||||| Sbjct 86140 CCCAGTCAGAGTCTTAACAAAGATTTGCAT 86111 >seq710 Length=73582 Score = 98.7 bits (108), Expect = 2e-15 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 68232 TTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATC- 68290 || || || ||||| || | || | || || || || |||||||| || || || Sbjct 11826 TTACCACCACGAAGACGAAGCACAAGATGAAGGGTCGAATCTTTTTGAATTGAGTAGTCT 11767 Query 68291 -GGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGG 68349 |||| |||| | ||||| ||||| || || || || ||||| | | ||||| || | Sbjct 11766 TGGAGGGTGT--TTCCATCCTCTAATTGTTTTCCTGCAAATATCAAACGCTGTTGATCAG 11709 Query 68350 GTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATT 68409 | ||||| ||||||||||| || ||||| || |||||| |||| ||| |||| || | Sbjct 11708 GGGGAATTCCTTCCTTGTCCTGGATCTTAGCTTTGACGTCCTCAATGCGATCTGTTGGCT 11649 Query 68410 CTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || | || ||| || || || || ||||| || || || ||||| Sbjct 11648 CGACCTCAAGCGTAATGTGCTTCCCAGTCAGAGTCTTAACAAAGATTTGCAT 11597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921605349985600