Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_012635.1 Length=168394 Score E Sequences producing significant alignments: (Bits) Value seq712 84.2 2e-11 >seq712 Length=73840 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 140739 ATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAAACAAGAAG 140798 |||||||| | |||| ||||||||| | || ||||| ||||||||||| ||||||| Sbjct 55331 ATAATCCAAACTTCGAACTCGGTTTTCTGCCACTCCTTTATTATTTTTCAATTCAAGAAG 55390 Query 140799 ATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGAATTCC 140858 | ||| |||||| ||||||||| ||| | || |||| | | || || |||| ||| Sbjct 55391 AGTTTGGACTTCCCAATGCCAAAAAGGGAAGGAAATAGTACCTCCTCCACCTCGAACTCC 55450 Query 140859 A 140859 | Sbjct 55451 A 55451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538722833443200