Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq272 435 4e-117 seq1372 300 2e-76 seq1067 275 8e-69 seq1455 181 1e-40 seq593 136 5e-27 seq2 127 3e-24 seq737 123 3e-23 seq422 122 1e-22 seq685 107 2e-18 seq476 96.9 4e-15 seq744 95.1 2e-14 >seq272 Length=125578 Score = 435 bits (482), Expect = 4e-117 Identities = 1074/1607 (67%), Gaps = 29/1607 (2%) Strand=Plus/Plus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 ||||||| | |||||||| ||||| |||||| | ||| || | ||| ||| ||| || Sbjct 92412 TTCATCTGCCTCTTTATATTTTTCTGCATCTGAAATCATTTTATTAATATCTGCTTGTGA 92471 Query 6628 TAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTC 6687 | || || || ||||| |||| |||||||||| ||||||| | ||||||| Sbjct 92472 AAGTCGACCATTTTCATTTTTAATTGTAATCTTTTTCACGTTACCCGTTGATTTATCTTG 92531 Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747 || ||||||| |||||||| ||||| |||||| || | || | ||||||||| | Sbjct 92532 TGCCGAAACATTCATAATACCATCTGCATTAACATCAAATGTAACTTCAATTTGTGGAAT 92591 Query 6748 ACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGT 6807 ||| | || || | |||||| || ||||||||||||||||| | || | | ||||| | Sbjct 92592 ACCACGTGGGGCTGGTGGAATTCCTGTTAAATCAAATGTACCTAATAGATTATTATCTCT 92651 Query 6808 CGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGC 6867 | || |||||||||||||| || ||||| || || || ||||||||||| Sbjct 92652 TGTTTTAGCTCGTTCACCTTCATAAACCTTAATAGTAACTGCTGGTTGATTATCACTAAA 92711 Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 || | || ||||| |||||| | ||||| || |||||||| ||||| | || Sbjct 92712 AGTGGTAAATGTTTGTGATTTCTTTGCCGGAATTGTTGTATTTCTTGGAATCAAAACTGT 92771 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||||| |||| ||||| | || | || || |||| || || || | | | Sbjct 92772 CATAACTTCACCTGCTGTTTCAATACCTAATGAAAGTGGTGAAACATCTAATAAAAGAAT 92831 Query 6988 GTCTTGAACAGATTC-GTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGT 7046 | || || | ||| | | || ||| | || ||||| ||||| || | || || | Sbjct 92832 ATTTTTGACTGTTTCTGATTGATT-ACCTTTCAAAATGGCTGCTTGAACTGCTGCTCCAT 92890 Query 7047 ATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCG 7106 | || || || |||||||| | || | | | | ||||| ||||| |||| Sbjct 92891 AGGCAACTGCTTCATCGGGATCAACACCTCGACATGGCTGCTTACCATTAAAGAAATCTT 92950 Query 7107 ATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCA 7166 | | ||||||| || ||||||| || ||||| || | ||| || || | | Sbjct 92951 GAAGAAGCTGTTGAACACGTGGAATTCGTGATGAACCACCAACAAGAACAATATCTGTAA 93010 Query 7167 CTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTAC 7226 | | |||||| || || | || || | || | | || || | ||| | | Sbjct 93011 CATCTGATTTAGACATATTAGCATCACGTAAAACTTGTGCAACTGGATTAATAGTTGAGC 93070 Query 7227 GGAACAAGTC--CATACACAGTTCCTCAAAACGTGCACGGGTAATGG-ATGTATAGAAAT 7283 |||| || || ||| | | || || || |||||| | ||| || ||| |||| Sbjct 93071 GGAATAATTCATCATTTAAATTT--TCGAACATTGCACGTGAAATATTATCCATA-AAAT 93127 Query 7284 CAACGCCGTCGTATAACGAATCA-ATTTCAATGGT--TGTTTGTGCCGTCGAAGATAACG 7340 || || || ||||| || ||| | | | || | |||| ||| || || ||| | Sbjct 93128 CATGACCTTCATATAATGAGTCACAAATAATTGATGCTGTTGTTGCTGTTGA---TAATG 93184 Query 7341 TTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGG-GTTACCGGAA 7399 ||| || || || |||||||| |||| |||| ||||| ||||| || | | || | Sbjct 93185 TTCTTTTAGCACGTTCACACGCGGTTCTTAAAGTTCGAAGTGCACGTGGTGATTTCGTTA 93244 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 | ||| | |||| ||| || ||| |||| || | || || | ||| Sbjct 93245 A-ATCACTTTTATATTTCTTTTGAAAACGATCAGCAAAATAATTAACAAGACGATTATCA 93303 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 |||||||| || || || |||||||| || || || || |||||||| ||||||| Sbjct 93304 AAATCTTCTCCTCCTAAATGTGTATCACCTGCTGTTGCACGAACTTCAAATGTACCTCCA 93363 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT- 7578 ||||| | ||| || ||||||||||| |||||||| || || ||||| || | || | Sbjct 93364 TCAATATCTAATAATGAAACATCAAATGTACCACCTCCAAGATCAAAGATTAAAACATGA 93423 Query 7579 CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATT 7638 ||| || | ||| | || || | || |||| || || || || ||||||||||| Sbjct 93424 CGT-TCTTTATCTGATTGCTCATTTAATCCAAACGCAATTGCTGCTGCTGTTGGTTCATT 93482 Query 7639 AATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTG 7698 |||||||||||| || | || |||||| | |||||||| || ||||| ||||| Sbjct 93483 GATAATACGAAGAACATTGATACCTGCAATAACACCTGCATCTTTAGTTGCTTGACGTTG 93542 Query 7699 CGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATA 7758 ||||||||| || || || || || | || || || || ||||| | | | Sbjct 93543 ACCATCGTTAAAATAAGCAGGAACTGTAATAACTGCATCAGTCACTTTTTCTGTTAATTG 93602 Query 7759 CGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAA 7818 | ||| || | ||||||||||| | | ||||| | ||||| ||||| | ||| Sbjct 93603 TGTTTCTGCAACTTCTTTCATTTTACTTAATACCATTGCAGAAATTTCTTCCGGATAAAA 93662 Query 7819 CTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGAT 7878 ||||| ||||| || || | | ||||||||| ||| |||| | |||| | || Sbjct 93663 ATGTTTTGTTTCCCCTTTCCATTGAACTTCAATGCGTGGTCTATCTGATTCACCACGAAT 93722 Query 7879 AACCTTATACGACCAATCTTTCATATCGTCTTGGACCTG-TTG-GTCCGAAAACTTTCTT 7936 ||| ||| | | ||||| || |||||| | ||| | || ||| ||| || || |||||| Sbjct 93723 AACTTTAAAAGGCCAATGTTCCATATCTTTTTGAA--TGATTGAGTCTGAGAATTTTCTT 93780 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || | | ||||||||||||| ||| ||| | || |||||||||| ||| || || Sbjct 93781 CCAATCATTCTTTTTGCATCAAAAATTGTATTTGTTGGATTCATGGCTGCTTGATTTTTG 93840 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || | || || | ||| || || || ||| ||||| || || || || || || ||| Sbjct 93841 GCTGAATCACCAACAAGTCGCTC---ATCTTCTGTAAATGCAACATAAGAAGGTGTTGTT 93897 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 ||||| || || || || ||||| || || || | | | | || || || || Sbjct 93898 CGATTACCCATATCATTTGCGATAATGTCAACTCGATTATGTCTGAAAACACCAACACAT 93957 Query 8117 GAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATT-TTAT 8162 ||||| || || || | ||||||||| |||||| |||||| |||| Sbjct 93958 GAATAAGTAGTACCAAGATCAATACCAATTGCT---GTCATTATTAT 94001 >seq1372 Length=17450 Score = 300 bits (332), Expect = 2e-76 Identities = 498/711 (70%), Gaps = 15/711 (2%) Strand=Plus/Minus Query 7444 AAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGAC 7503 || |||||| ||| || ||||| ||||| | ||| ||||| || || || || || Sbjct 9999 AACGAGTCTGTTATCAAAGTCTTCGCCACCAAGGTGAGTATCACCAGCTGTGGCGCGAAC 9940 Query 7504 TTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTC 7563 ||| || ||||| || || || | || | |||||||| || ||||||||||| || || Sbjct 9939 TTCGAACATACCACCATCGATATCTAGGAGGGAAACATCGAATGTACCACCACCAAGATC 9880 Query 7564 AAAAATGAGTACGTT-CGT--ATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGC 7620 ||||| | || | ||| || || |||| ||| | | || ||| | || ||||| Sbjct 9879 GAAAATCAAAACATGACGTTCATTATCAGCTTT-TTCATTTA-AG-CCGAAAGCAATAGC 9823 Query 7621 CGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATC 7680 || || ||||| || ||||||||||||||| |||| || |||||| | ||||| Sbjct 9822 TGCTGCTGTTGGCTCGTTAATAATACGAAGAACATTCAAACCTGCAATAACACCTGCATC 9763 Query 7681 TTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGT 7740 ||| || ||||| ||||| ||| || ||||| || || || || || || || || || Sbjct 9762 TTTTGTAGCTTGACGTTGGCCATCATTGAAGTAAGCAGGAACTGTAACAACTGCATCTGT 9703 Query 7741 GACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGA 7800 ||||| | | | || ||| || | |||||||| ||| | |||||| | ||| Sbjct 9702 AACTTTTTCTGTTAATTGCGTTTCAGCAACTTCTTTCATCTTGCCCAAAACCATGGCTGA 9643 Query 7801 AATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT 7860 ||| ||||| | ||| || || |||||||| || | | |||| ||| || | Sbjct 9642 AATTTCTTCTGGATAAAATTGCTTTGTTTCACCCTTCCATTGGACTTGAATACGTGGCCT 9583 Query 7861 ATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTG 7920 || ||| |||| |||||||||| | | ||| | || |||||| | |||||| | | Sbjct 9582 GTCTGCATCACCACGGATAACCTTGAAAGGCCAGTGTTCCATATCTTTTTGGACGATTGG 9523 Query 7921 GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCAT 7980 || |||||||| | ||||| | | |||||||| || ||||| ||| | || ||||| Sbjct 9522 ATCTGAAAACTTACGGCCGATCATTCTTTTTGCATCGAAGACTGTATTTGTTGGATTCAT 9463 Query 7981 GGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGAC 8040 |||| ||| ||||| || || || || | ||||||||| || ||| || || ||||| Sbjct 9462 AGCTGCTTGATTCTTTGCTGCATCACCAACAAGACGTTC---ATCTTCTGTGAAAGCGAC 9406 Query 8041 GTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTG 8100 || || || || |||| || || |||||| |||||||| || ||||| ||| || Sbjct 9405 ATAAGAAGGTGTTGTTCTGTTACCCATGTCGTTGGCAATAATATCAACGCG---GTTGTG 9349 Query 8101 CC---AGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || |||| |||||||| || || ||||| || | ||| || || ||||| Sbjct 9348 CCTGAAGACACCGACGCATGAGTATGTTGTACCAAGATCTATTCCAATTGC 9298 Score = 210 bits (232), Expect = 3e-49 Identities = 378/548 (69%), Gaps = 6/548 (1%) Strand=Plus/Minus Query 6521 CAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGTACTT-TTCATCTTCATC 6579 || ||| |||||| ||||||| || || ||||| || | |||| |||||| | || Sbjct 10922 CAATAGCCTTCGAGGGCATTCTTAGCTTCAACCTTCTTT-CTAACTTGTTCATCAGCTTC 10864 Query 6580 TTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTT 6639 || || ||||| ||||| ||||| || ||||| ||| ||| || | | ||||| Sbjct 10863 CTTGTATTTTTCAGCATCAGAAACCATTTTATCAATATCTGCTTGTGAAAGACGTCCCTT 10804 Query 6640 ATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATT 6699 |||||| | || || ||||| | | ||||| | | ||||||| |||| || || Sbjct 10803 TTCATTCTTGATTGTGATCTTCTTGACGTTACCTGTTGATTTATCTTGAGCAGAAACGTT 10744 Query 6700 CAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGC 6759 || |||||||| || | ||| || || | || | ||||||||| ||| | ||||| Sbjct 10743 CATAATACCATCGGCGTTAACGTCAAATGTAACTTCAATTTGTGGGACACCACGTGGTGC 10684 Query 6760 GGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTT--A 6817 | |||||| || || | ||||||||||||||| | ||||||| || ||||| | Sbjct 10683 TGGTGGAATTCCTGTAAGATCAAATGTACCAAGAAGGTTGTTATC--ACGTGTTCTTGAA 10626 Query 6818 CGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAG 6877 || ||||||||||| ||||||||||| || || ||||| ||||| |||| |||| Sbjct 10625 CGCTCACCTTCATAAACTTTAATTGTAACAGCTGGTTGGTTATCACTGAATGTTGTGAAG 10566 Query 6878 ATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCA 6937 | |||| |||||| | |||||| || | ||||| || || | ||||| || || Sbjct 10565 ACTTGTGATTTCTTGGCTGGAATTGTTTTGTTTCTTGGGATCAAAACTGTCATGATTTCA 10506 Query 6938 CCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACA 6997 || ||||||| || || || || || | || || | || | | |||| ||| Sbjct 10505 CCAGCTGTTTCGATACCGAGGGAAAGTGGAGCAACATCGAGAAGAAGGATATCTTTGACA 10446 Query 6998 GATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCC 7057 | ||| |||||| | | |||||||||||| || | || || || ||||| || Sbjct 10445 GCTTCTGATGTATCACCCTTGATGATGGCGGCTTGAACGGCAGCACCATAAGCGACGGCT 10386 Query 7058 TCATCGGG 7065 ||||| || Sbjct 10385 TCATCTGG 10378 >seq1067 Length=33406 Score = 275 bits (304), Expect = 8e-69 Identities = 477/694 (69%), Gaps = 3/694 (0%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| || ||||| ||||| | ||| ||||| || || || || ||||| || ||||| Sbjct 10769 ATCAAAGTCTTCGCCACCAAGGTGNGTATCNCCAGCTGTGGCGCGAACTTCGAACATACC 10828 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || || || | | | |||||||| || ||||||||||| || || || ||||| || Sbjct 10829 GCCGTCGATATCGAGGAGGGAAACATCGAATGTACCACCACCGAGATCGAAGATGAGAAC 10888 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || || || || |||| | ||||||| | || ||||| || || |||||||| Sbjct 10889 GTGGCGCTCATCATCGGACTTCTCGTTGAGACCGAAGGCAATAGCGGCGGCTGTTGGTTC 10948 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || ||||| || ||| | || || ||| | ||||| || || ||||| || Sbjct 10949 GTTGATGATACGGAGGACGTTTAATCCGGCGATAACACCNGCATCCTTTGTGGCTTGACG 11008 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| |||||| ||||| || || || || ||||| ||||| |||||||| | ||| Sbjct 11009 TTGGCCATCGTTGAAGTAAGCTGGAACTGTAACGACTGCGTCTGTGACTTTTTCTGTGAG 11068 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 | | ||| |||| || ||||| ||| | |||||| | || || ||||| | Sbjct 11069 TTGTGTTTCGGCGACTTCCTTCATCTTGCCCAAAACCATGGCGGAGATTTCTTCTGGNTA 11128 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 || ||||| ||||| || || | | |||| || || | || || | ||| | Sbjct 11129 GAATTGTTTGGTTTCTCCCTTCCATTGGACTTGGATTCGTGGCCTGTCGGCGTCTCCGCG 11188 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 || || ||| | | ||| | || |||||| | |||||| | | || |||||||| | Sbjct 11189 GACAATCTTGAATGGCCAGTGTTCCATATCCTTTTGGACGATTGGATCTGAAAACTTACG 11248 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||||| | ||| || ||||| || |||||||| | ||||||||||| | ||||||||| Sbjct 11249 ACCGATCATACGTTTGGCATCGAAGACTGTGTTGATTGGGTTCATGGCAGCTTGGTTCTT 11308 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 || || || |||| ||| | ||| | || || || ||||| || ||||| || || Sbjct 11309 AGCTGCATCACCGACAAGTCTTTC---GTCGTCTGTGAATGCGACATAAGATGGTGTTGT 11365 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || || ||||| || || || || || |||| || | ||| || ||||| Sbjct 11366 ACGGTTACCCATATCGTTGGCGATGATATCGACACGGTTGTGGCGGAAGATACCAACGCA 11425 Query 8116 CGAATACGTTGTTCCTAAATCAATACCGATTGCT 8149 ||||| ||||| || | ||| || ||||||||| Sbjct 11426 GGAATATGTTGTACCAAGATCGATTCCGATTGCT 11459 Score = 167 bits (184), Expect = 3e-36 Identities = 368/548 (67%), Gaps = 6/548 (1%) Strand=Plus/Plus Query 6521 CAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGTACTT-TTCATCTTCATC 6579 |||||| |||||| | ||||| || || ||||| || ||| |||| |||||| | || Sbjct 9834 CAGTAGCCTTCGAGGGCGTTCTTGGCTTCAACCTTCTT-GCGGACTTGTTCATCGGCTTC 9892 Query 6580 TTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTT 6639 || || || || ||||| ||||||||| || || ||| ||| || | | ||||| Sbjct 9893 CTTGTATTTCTCGGCATCAGCGACCATCTTATCGATATCTGCTTGTGAGAGACGTCCCTT 9952 Query 6640 ATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATT 6699 || ||| | || || ||||| | | ||||| | | ||||||| ||| || || Sbjct 9953 TTCGTTCTTGATTGTGATCTTCTTGACGTTACCTGTTGATTTATCTTGGGCAGAAACGTT 10012 Query 6700 CAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGC 6759 || ||||||| || | ||| ||||| | || | |||||||| || | ||||| Sbjct 10013 CATGATACCATCGGCGTTAACGTCGAATGTAACTTCGATTTGTGGGACGCCACGTGGTGC 10072 Query 6760 GGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTT--A 6817 | ||| || || || | || ||||||||||| | ||||||| || ||||| | Sbjct 10073 TGGTGGGATTCCTGTAAGGTCGAATGTACCAAGAAGGTTGTTATC--ACGTGTTCTTGAA 10130 Query 6818 CGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAG 6877 ||||||||||| || || || ||||| || || || || ||||| |||| |||| Sbjct 10131 CGTTCACCTTCGTAAACCTTGATTGTAACAGCTGGNTGGTTATCGCTGAATGTTGTGAAG 10190 Query 6878 ATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCA 6937 | ||| ||||| | ||| || || || ||||| || || | ||||| || || Sbjct 10191 ACTTGGGACTTCTTGGCTGGGATTGTTGTGTTTCTTGGGATCAAAACTGTCATGATTTCA 10250 Query 6938 CCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACA 6997 || ||||||| || || || || || | || || | || | | || | || Sbjct 10251 CCAGCTGTTTCGATACCGAGNGAAAGTGGAGCAACATCGAGAAGAAGGATATCCTTGACG 10310 Query 6998 GATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCC 7057 ||||| || ||| | | ||||||||||||||| | || ||||| ||||| || Sbjct 10311 GATTCTGATGTNTCGCCCTTGATGATGGCGGCTTGGACGGCAGCACCGTAGGCGACGGCT 10370 Query 7058 TCATCGGG 7065 ||||| || Sbjct 10371 TCATCTGG 10378 >seq1455 Length=15174 Score = 181 bits (200), Expect = 1e-40 Identities = 279/394 (71%), Gaps = 8/394 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| |||||||| || || | ||| ||||| || || || || ||||| |||| Sbjct 3344 ATCAAAATCTTCTCCTCCAAGGTGAGTATCACCGGCTGTGGCGAGCACTTCGAAGAAGGA 3285 Query 7516 TCCTTCAATGTTTAACAACG-AAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574 ||||||| | || || | ||||||| || |||||||| || || || |||| ||| | Sbjct 3284 ATCTTCAAT-TGAAAGAAGGGAAACATCGAATGTACCACCTCCAAGATCGAAAACGAGGA 3226 Query 7575 CGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || | | || || || ||||||||||||||| |||||||| || || ||||||| Sbjct 3225 ---TCTTTTGGTTATCCTT---CTTATCGAGACCGTAGGCGATAGCGGCGGCTGTTGGTT 3172 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || | ||||| | | ||| || ||||| || | | ||||| || || |||| | Sbjct 3171 CGTTGAGGATACGCATAACGTTGAGACCAGCGATGGCACCAGCATCCTTTGTGGCTTTAC 3112 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 |||| | ||| || || ||||| || || || ||||| |||| | ||| | ||||||||| Sbjct 3111 GTTGGGCATCATTGAAATAGGCTGGAACTGTAACGACGGCGTTCTTGATTGTCTTACCGA 3052 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814 | || ||| || | | ||||| || ||||||||||| | ||| || ||||| | | Sbjct 3051 GGTAGTCTTCAGCAACGTTCTTCATCTTTGTAAGAACCATGGCTGAGATTTCTTCTGGGG 2992 Query 7815 CAAACTGTTTCGTTTCACCGTTAAAATCAACTTC 7848 | || || |||||||| || || |||| ||| Sbjct 2991 AGAGTTGCTTGGTTTCACCTTTGAATTCAAGTTC 2958 >seq593 Length=310377 Score = 136 bits (150), Expect = 5e-27 Identities = 273/398 (69%), Gaps = 14/398 (4%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||||||||| | ||| ||||| || || || |||||||||| || Sbjct 160062 TCGAAATCTTCACCACCGAGGTGAGTATCACCGTTTGTGGCAAGAACTTCAAAGAGGCCA 160121 Query 7517 CCTTCAATGTTTAACAAC-GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 |||| | | || ||| ||||||||||| ||||||||||| ||||| |||| | | Sbjct 160122 TCTTCGAC-TGAAAGAACTGAAACATCAAATGTACCACCACCAAGGTCGAAAACTAAGAT 160180 Query 7576 GTTCGT--ATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 ||| | ||| | | || ||| ||| ||||| |||| | || || ||||| Sbjct 160181 CTTCTTCGATC--CCTTTTGGTT------GAGTCCGTAGGCGAGGGAGGCGGCTGTTGGC 160232 Query 7634 TCATTAATAATACGAA-GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || || | ||||||| ||| ||| ||||| | || || | ||||| | || || | Sbjct 160233 TCGTTGAGGATACGAACGAC-GTTGAGGCCTGAGATTGTACCGGCATCGATTGTAGCCTT 160291 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 ||||| | |||||| || || || || || || | || |||| | ||||| || Sbjct 160292 ACGTTGGGCATCGTTGAAATATGCTGGAACTGTGATAACGGCGTTCTTGACTGGGCGGCC 160351 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGC 7812 ||| || ||| ||||| | ||||| |||| ||||||||| | ||| || ||||| | Sbjct 160352 GAGGTAGTCTTCGGCGATCTGCTTCATCTTGGAAAGAACCATGGCTGAGATTTCTTCTGG 160411 Query 7813 CGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAA 7850 | || | |||| ||| || || || ||||||| || Sbjct 160412 AGAGAAAAGCTTCGATTCGCCTTTGAATTCAACTTGAA 160449 >seq2 Length=259330 Score = 127 bits (140), Expect = 3e-24 Identities = 272/398 (68%), Gaps = 14/398 (4%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||||||||| | ||| ||||| || || || |||||||||| || Sbjct 76980 TCGAAATCTTCACCACCGAGGTGAGTATCACCGTTTGTGGCAAGAACTTCAAAGAGGCCA 77039 Query 7517 CCTTCAATGTTTAACAAC-GAAACATCAAACGTACCACCACCCAGGTC-AAAAATGAGTA 7574 |||| | | || ||| |||||||| || ||||||||||| || || |||| | || Sbjct 77040 TCTTCGA-CTGAAAGAACTGAAACATCGAATGTACCACCACCAAGATCGAAAACTAAGAT 77098 Query 7575 CGT-TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | | | | ||| | | || ||| ||| ||||| || | | || || |||||| Sbjct 77099 CTTCTTGGATC--CCTTTTGGTT------GAGTCCGTAGGCAAGGGAGGCGGCTGTTGGT 77150 Query 7634 TCATTAATAATACGAA-GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || || | ||||||| ||| ||| || || | || || | ||||| | || || | Sbjct 77151 TCGTTGAGGATACGAACGAC-GTTGAGACCTGAGATTGTACCAGCATCGATTGTTGCCTT 77209 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 ||||| | |||||| || || || || || || | || |||| | ||||| || Sbjct 77210 ACGTTGGGCATCGTTGAAATAAGCTGGAACTGTGATAACGGCGTTCTTGACTGGGCGGCC 77269 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGC 7812 ||| || ||| ||||| | ||||| |||| |||| ||| | |||||| ||||| | Sbjct 77270 GAGGTAATCTTCAGCGATTTGCTTCATCTTGGCGAGAATCATGGCTGAAATTTCTTCTGG 77329 Query 7813 CGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAA 7850 | || |||| |||||||| || || ||||||| || Sbjct 77330 GGAGAAGAGTTTGGTTTCACCCTTGAATTCAACTTGAA 77367 >seq737 Length=69444 Score = 123 bits (136), Expect = 3e-23 Identities = 195/279 (70%), Gaps = 3/279 (1%) Strand=Plus/Minus Query 7871 CCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAAC 7930 ||| ||| || ||| | | ||| | || |||||| | |||||| | | || |||||| Sbjct 4527 CCGCGGACAATCTTGAATGGCCAGTGTTCCATATCCTTTTGGACGATTGGATCTGAAAAC 4468 Query 7931 TTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGG 7990 || | ||||| | ||| || || || || |||||||| | ||||||||||| | |||| Sbjct 4467 TTACGACCGATCATACGTTTGGCGTCGAAGACTGTGTTGATTGGGTTCATGGCGGCTTGG 4408 Query 7991 TTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG 8050 ||||| || || || |||| ||| | ||| | || || || ||||| || ||||| Sbjct 4407 TTCTTAGCTGCATCACCGACAAGTCTTTC---GTCGTCTGTGAATGCGACATAAGATGGA 4351 Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCG 8110 || || || || || ||||| || || || || || |||| || | ||| || Sbjct 4350 GTTGTGCGGTTACCCATATCGTTAGCGATGATATCGACACGGTTGTGGCGGAAGATACCA 4291 Query 8111 ACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCT 8149 ||||| || || ||||| || | |||||| || || ||| Sbjct 4290 ACGCAGGAGTATGTTGTACCAAGATCAATTCCAATAGCT 4252 >seq422 Length=116156 Score = 122 bits (134), Expect = 1e-22 Identities = 275/410 (67%), Gaps = 10/410 (2%) Strand=Plus/Plus Query 22443 ATTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGA 22502 |||||||||||| || |||||||| ||||||||| ||| | ||| |||||| || || Sbjct 91776 ATTTTATCAGGCTTCAACATCAGAACTCTACGGTTTAGTCCAAGAAGTTCCACAGAAGGA 91835 Query 22503 AAATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAA-ATTGATGGGATATTGGG 22561 || || || || || || | || || || | || || || || | |||||| Sbjct 91836 AACAACTCCATTCTATCCAAGATCGCCTTACGCCTGCGCCAAGCTTTAT-GCTTATTGGA 91894 Query 22562 CGACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACC 22621 ||||| || ||| ||||| |||| || ||| ||||| || || || ||||||||| Sbjct 91895 TCACAGTAAACTATCGAGAAGCATATGGAATGCATGCATCTAACGGCATTTTGTTCAACC 91954 Query 22622 ACGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTA 22681 | ||||| ||| || ||||||| || ||||| | || || || | || ||| || | Sbjct 91955 ATGAATCTCCGCTTCGCGGTGAAACATTTGTGACCAGGAAGATCACCCGCGCTGTTGCGA 92014 Query 22682 ATATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATT 22741 | ||| | ||| | ||||| || || || |||||| || ||| |||| | Sbjct 92015 AGATCCTTCTCGGTCAGCAAAACGAAATAATGCTCGGAAACCTAAGCGCTAAAAGAGACT 92074 Query 22742 GGGGTCATGCACGCGATTA----CGTGAAATGTATGTGGAAAATATTACAACAAGATAAA 22797 |||| ||||| ||||| || | |||| || | || | ||| | || | | Sbjct 92075 GGGGCCATGCGAAAGATTATGTTCGCGCAATGCATCT----CATCCTCCAAAAGGACACA 92130 Query 22798 CCGGAAGATTTTGTTATTGCAACAGGCGTAACAACAACCGTGAGAGAATT 22847 || |||| |||| | || ||||| || | || ||||| |||||||| Sbjct 92131 CCCTCTGATTATGTTGTCGCCACAGGAGTTTCGACGACCGTTAGAGAATT 92180 >seq685 Length=78159 Score = 107 bits (118), Expect = 2e-18 Identities = 224/327 (69%), Gaps = 9/327 (3%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||||||||| | | ||||| || || ||||| ||||| || ||||| Sbjct 43967 ATCGAAATCTTCACCACCGAGGAAAGTATCACCATTTGTAGCTTTCACTTCGAAAATACC 43908 Query 7516 TCCTTCAATGTTT--AACAAC-GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAG 7572 ||| || || || || || | |||||| || |||||||| |||||||||| || Sbjct 43907 GTCTTTGCTGATTTCAAGAATAGATATATCAAAAGTGCCACCACCAAGGTCAAAAAC-AG 43849 Query 7573 TACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 | | || | | | ||| ||| | || | ||| || || | || || || ||||| Sbjct 43848 CAATT--GTTT-GAC--CTTGCTTCCTTTCTACACCATAGGCTAGGGCAGCAGCTGTTGG 43794 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || ||||||||||| ||||| ||||| || || | ||||||||||| || || Sbjct 43793 CTCGTTAATAATACGGGTTACGTTCAATCCAGCGATTTTTCCAGCATCTTTCGTGGCCTG 43734 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 ||||| ||||| || || || || || || || | || |||| ||| | | | | Sbjct 43733 ACGTTGAGAATCATTGAAATATGCTGGAACTGTAATCACGGCGTTTTTGATGTCCGTTCT 43674 Query 7753 GAGATACGATTCCGCGATATCTTTCAT 7779 ||| || | ||| |||||||||| Sbjct 43673 GAGGTATTTTGATGCGGTATCTTTCAT 43647 >seq476 Length=113956 Score = 96.9 bits (106), Expect = 4e-15 Identities = 225/332 (68%), Gaps = 13/332 (4%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | | ||||| || || ||||||||||| || || || Sbjct 40577 ATCGAAATCCTCACCACCGAGGAAAGTATCGCCGTTTGTTGCTTTGACTTCGAAAATTCC 40518 Query 7516 TCCTTCAATGTTT---AACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAG 7572 ||| || || | | ||||||||||| || ||||| || || || |||| | Sbjct 40517 GTCTTTGCTGATTTCGAGGATAGAAACATCAAAAGTTCCACCGCCAAGATCGAAAACGGC 40458 Query 7573 TACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 || || | | | || || |||| || | || || |||| || || || || || Sbjct 40457 GACA---GTTTGGCCTTCCTT--TCTT-TCAACGCCATAAGCGAGGGCGGCGGCTGTAGG 40404 Query 7633 TTCATTAATAATACGAA-GACAGTTCAGG-CCAGCAATAGTTGCCGCATCTTTCGTCGCT 7690 ||| || | |||||| ||| |||| | || ||||| | | |||||||| || ||| Sbjct 40403 TTCGTTTACAATACGCTCGAC--TTCAAGACCGGCAATTTTACCGGCATCTTTTGTGGCT 40346 Query 7691 TGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTA 7750 || || || ||||| || || || || || || || || || || | | ||||| | | Sbjct 40345 TGACGCTGAGAATCATTGAAATATGCTGGAACTGTAACAACGGCTTTCTTGACTGTATCG 40286 Query 7751 CCGAGATACGATTCCGCGATATCTTTCATTTT 7782 || | ||| | ||| || | ||||||||||| Sbjct 40285 CCCAAATAAGTTTCGGCTGTTTCTTTCATTTT 40254 >seq744 Length=68509 Score = 95.1 bits (104), Expect = 2e-14 Identities = 149/210 (71%), Gaps = 10/210 (5%) Strand=Plus/Plus Query 6714 CATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGG---AATAC 6770 ||| || |||||| | || | ||||||||| |||| | ||| |||||| ||| | Sbjct 36800 CATTAATATCGAATGTAACTTCAATTTGTGGAATACCAC---GTGTGGCTGGCGGAATTC 36856 Query 6771 CCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTT--ACGTTCACCTTC 6828 | | ||||||||||||||||| |||| | ||||| || || || ||||| ||||| Sbjct 36857 CTGCTAAATCAAATGTACCAAATAAATTATTATC--TCATGTTTTTGCTCGTTCGCCTTC 36914 Query 6829 ATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTT 6888 ||| |||||||| || || || | |||||||| | ||| || |||| | ||| Sbjct 36915 ATAAACTTTAATCGTGACTGCTGACTGATTATCACGAAAAGTTATAAACATTTATGATTT 36974 Query 6889 CTTAGATGGAATCGTCGTATTTCTCGGAAT 6918 ||| | |||||| || ||| ||| |||| Sbjct 36975 CTTTGCTGGAATTGTTTTATATCTTTGAAT 37004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635121050043200