Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq769 82.4 9e-11 >seq769 Length=64858 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 151918 AATGTTAACATTCTTGAGGGCATTAGGTTCTATGTATCCTTCGCTTGCTCGTTTGCGTTT 151977 ||||| ||||||||||| || ||| | ||||| || || ||||| ||||| ||||| || Sbjct 8709 AATGTGAACATTCTTGAAGGAATTCGTTTCTACGTTTCTTTCGCATGCTCTTTTGCATTC 8650 Query 151978 GGTGAACTCAAAGTTATGGAAGGATCCGCTAAAATTATCTCTCTCATCGCCAGAGATGAA 152037 |||||| ||| | |||| ||| || ||| || |||||||| | |||||| Sbjct 8649 GGTGAAAATAAATTAATGGTTGGAAATGCATCAATCATTAAGCTCATCGCAACTGATGAA 8590 Query 152038 AGCCAACATCTTGTCCTTACTCA 152060 | |||||||| | ||| |||| Sbjct 8589 TGTCAACATCTCATTCTTTCTCA 8567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579202084563200