Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq769 91.5 2e-13 >seq769 Length=64858 Score = 91.5 bits (100), Expect = 2e-13 Identities = 85/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 92504 CCATTACTTTTAGTTCACCGAAAGCAAAAGAGCAAGCGAAAGAAACATAGAAACGAATAC 92563 |||||| ||| ||||||||| ||||||||||| ||||||||||| ||||||||||| | Sbjct 8631 CCATTAATTTATTTTCACCGAATGCAAAAGAGCATGCGAAAGAAACGTAGAAACGAATTC 8690 Query 92564 CTTCCAGAATATTAACAGTCATGACTGCACGGAAAAGTTTTCTCTTT 92610 |||| ||||| || ||| | | | |||| ||| | || | ||||| Sbjct 8691 CTTCAAGAATGTTCACATTTACAAGTGCA-AGAAGAATTCTTTCTTT 8736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571263031438400