Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq272 244 9e-59 seq1372 188 6e-42 seq576 159 3e-33 seq1146 122 7e-22 seq451 107 2e-17 seq685 104 2e-16 seq744 96.9 3e-14 seq476 96.9 3e-14 seq1455 93.3 3e-13 seq816 93.3 3e-13 seq132 91.5 1e-12 seq1067 89.7 4e-12 seq1271 87.8 1e-11 seq665 86.0 5e-11 >seq272 Length=125578 Score = 244 bits (270), Expect = 9e-59 Identities = 419/602 (70%), Gaps = 17/602 (3%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTT---GGCAAAATGG 550047 ||| || ||||| ||| | || || || ||| ||||||||||||| | || ||| | Sbjct 93990 AGCAATTGGTATTGATCTTGGTACTACTTATTCATGTGTTGGTGTTTTCAGACATAATCG 93931 Query 550048 TAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTT 550107 |||||| ||||| || |||||| ||||| |||| || || ||||||||| | || Sbjct 93930 ---AGTTGACATTATCGCAAATGATATGGGTAATCGAACAACACCTTCTTATGTTGCATT 93874 Query 550108 CACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTAC 550167 || ||| ||| | | ||||||||| |||| ||| ||||||| | ||||| || Sbjct 93873 TACAGAAGATGAGCGACTTGTTGGTGATTCAGCCAAAAATCAAGCAGCCATGAATCCAAC 93814 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227 ||||| ||||||||||| ||| | | |||||||||| || || || | |||| Sbjct 93813 AAATACAATTTTTGATGCAAAAAGAATGATTGGAAGAAAATTCTCAGACTCAATCATTCA 93754 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTT---TCTGGAAAACCTTATAT 550284 ||||||| | ||||||||||| || || || || | || | | ||| || Sbjct 93753 AAAAGATATGGAACATTGGCCTTTTAAAGTTATTCGTGGTGAATCAGATAGACCACGCAT 93694 Query 550285 TGAAGCTACTCATG--AAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATG 550342 ||||| | ||| |||| ||||| |||| || ||| ||||||| | ||| Sbjct 93693 TGAAGTTCA--ATGGAAAGGGGAAACAAAACATTTTTATCCGGAAGAAATTTCTGCAATG 93636 Query 550343 GTTTTAATGAAAATGAAACAAACAGCC--AGTGCTTTTGTTGGTCAAGAAGTTACGGATG 550400 || |||| ||||||||| || || | | || | || |||| || |||| Sbjct 93635 GTATTAAGTAAAATGAAAGAAGTTGCAGAAACACAATTAACAG--AAAAAGTGACTGATG 93578 Query 550401 CAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTG 550460 |||| || || || || || |||||||| || ||||||||||| ||||||||||| | Sbjct 93577 CAGTTATTACAGTTCCTGCTTATTTTAACGATGGTCAACGTCAAGCAACTAAAGATGCAG 93518 Query 550461 GACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTG 550520 | |||||| || | |||||||||||||||||||||||||| || || || ||| ||| Sbjct 93517 GTGTTATTGCAGGTATCAATGTTCTTCGTATTATCAATGAACCAACAGCAGCAGCAATTG 93458 Query 550521 CATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAG 550580 | | |||| | || | || ||| |||||| | |||| | ||||||||| ||||| Sbjct 93457 CGTTTGGATTAAATGAGCAATCAGATAAAGAACGTCATGTTTTAATCTTTGATCTTGGAG 93398 Query 550581 GT 550582 || Sbjct 93397 GT 93396 Score = 188 bits (208), Expect = 6e-42 Identities = 551/828 (67%), Gaps = 32/828 (4%) Strand=Plus/Minus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTG 551847 || ||| | ||| | || || ||||||||||||||| | || || || || | || || Sbjct 93332 GGTGATACACATTTAGGAGGAGAAGATTTTGATAATCGTCTTGTTAATTAT--TTTGCTG 93275 Query 551848 AAGATTTT-AAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGT 551906 | |||| ||| |||| | ||||| ||| || | | ||| | || ||||| | Sbjct 93274 ATCGTTTTCAAAAGAAATATAAAAGT-GATTTAACGAAATCACCACGTGCACTTCGAACT 93216 Query 551907 CTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACT-CA--AACCACT 551963 ||||||| || || ||| | || ||| || | | ||| | | || || | | | | Sbjct 93215 TTAAGAACCGCGTGTGAACGTGCTAAAAGAACATTATCAACAGCAACAACAGCATCAATT 93156 Query 551964 ATTGAAGTAGATTCATTATTTGAGGGAATTGATTATA---ATACGCCTATTTCGAGGGCC 552020 ||| || || ||||||| ||| || ||||| || ||| |||||| | || Sbjct 93155 ATTT--GT-GACTCATTATATGAAGGTCATGATTTTATGGATAA---TATTTCACGTGCA 93102 Query 552021 AAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTT 552080 | || ||| || | | ||| | || | ||| ||| | ||||| | ||||||| Sbjct 93101 ATGTTCGAAAATTTAAATGATGAATTATTCCGCTCAACTATTAATCCAGTTGCACAAGTT 93042 Query 552081 TTAAGAGATTCAAAGATTGATAAATCCAAAGT-ACATGAAATTGTGCTTGTTGGTGGATC 552139 ||| | ||| | || || |||||| | || ||| || ||||| ||||||||||| || Sbjct 93041 TTACGTGATGCTAATATGTCTAAATCAGATGTTACA-GATATTGTTCTTGTTGGTGGTTC 92983 Query 552140 TACAAGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTA 552197 || ||||||| ||| | | | ||| | || ||| |||||||| | | Sbjct 92982 ATCACGAATTCCACGTGTTCAACAGCTTCTTCAAGAT-TTCTTT-AATGGTAAGCAGCCA 92925 Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257 | | ||||| |||| ||||| || ||||||||||| || ||| |||||||||| ||| Sbjct 92924 TGTCGAGGTGTTGATCCCGATGAAGCAGTTGCCTATGGAGCAGCAGTTCAAGCAGCCATT 92865 Query 552258 CTTTCTGGACAA-ACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCT 552316 | || | | | | |||| | | |||||||| | | |||||||| | || || Sbjct 92864 TTGAAAGGTAATCAATCA-GAAACAGTCAAAAATATTCTTTTATTAGATGTTTCACCACT 92806 Query 552317 ATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTAC 552376 || | ||| | ||||||| || | ||||||| | | || |||||||| || Sbjct 92805 TTCATTAGGTATTGAAACAGCAGGTGAAGTTATGACAGTTTTGATTCCAAGAAATACAAC 92746 Query 552377 TATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTAC 552436 ||||| || ||||| | |||| | || | | ||||||||| | || ||||| Sbjct 92745 AATTCCGGCAAAGAAATCACAAACATTTACCACTTTTAGTGATAATCAACCAGCAGTTAC 92686 Query 552437 AATTCAAATTTTTGAAGGAGAAAGA---AAATTCACTAAAGATAATAATCAACTTGGTAC 552493 ||| | ||| |||||| ||| || ||| || | ||||||||||| | | ||||| Sbjct 92685 TATTAAGGTTTATGAAGGTGAACGAGCTAAA---ACAAGAGATAATAATCTATTAGGTAC 92629 Query 552494 TTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTT 552553 ||| ||||| ||| ||||| || || || ||||| | || |||||||||||||| || Sbjct 92628 ATTTGATTTAACAGGAATTCCACCAGCCCCACGTGGTATTCCACAAATTGAAGTTACATT 92569 Query 552554 CGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATC 552601 ||| | |||| |||| ||| ||||||| | || |||||||| Sbjct 92568 TGATGTTAATGCAGATGGTATTATGAATGTTTCGGCACAAGATAAATC 92521 >seq1372 Length=17450 Score = 188 bits (208), Expect = 6e-42 Identities = 408/601 (68%), Gaps = 17/601 (3%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTT---GGCAAAATGGT 550048 || || || |||||| | || || ||||| || || ||||| | |||| || | Sbjct 9298 GCAATTGGAATAGATCTTGGTACAACATACTCATGCGTCGGTGTCTTCAGGCACAACCGC 9357 Query 550049 AAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTC 550108 ||||| ||||||||||| || ||||||||||| || || |||||||| ||||| Sbjct 9358 ---GTTGATATTATTGCCAACGACATGGGTAACAGAACAACACCTTCTTATGTCGCTTTC 9414 Query 550109 ACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACC 550168 || ||| ||||| | | ||||||||||||||||| ||||||| || ||||| || Sbjct 9415 ACAGAAGATGAACGTCTTGTTGGTGATGCAGCAAAGAATCAAGCAGCTATGAATCCAACA 9474 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAG-AAGTTTTAATGATTCGACTGTTCA 550227 ||||| | || ||||| ||| | | || || | ||||||| | ||| | | || || Sbjct 9475 AATACAGTCTTCGATGCAAAAAGAATGATCGGCCGTAAGTTTTCA-GATCCAATCGTCCA 9533 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGT---TAATGTTTCTGGAAAACCTTATAT 550284 ||||||| | || ||||||||| | || | | || | | | | || ||| Sbjct 9534 AAAAGATATGGAACACTGGCCTTTCAAGGTTATCCGTGGTGATGCAGACAGGCCACGTAT 9593 Query 550285 TGAAGCTACTCATGAAGGATCTGTTAAA-CAATTTTCACCAGAACAAATTTCATCTATGG 550343 | ||| | | ||||| | ||| ||||||| |||||| |||||||| | |||| Sbjct 9594 TCAAG-TCCAATGGAAGGGTGAAACAAAGCAATTTTATCCAGAAGAAATTTCAGCCATGG 9652 Query 550344 TTTTAATGAAAATGAAACAAACAGC--CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGC 550401 |||| || |||||| || || | || || | || ||||||| ||||| Sbjct 9653 TTTTGGGCAAGATGAAAGAAGTTGCTGAAACGCAATTAACAG--AAAAAGTTACAGATGC 9710 Query 550402 AGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGG 550461 ||| | || || || || || || ||||| |||||||||||||| |||||||| || Sbjct 9711 AGTTGTTACAGTTCCTGCTTACTTCAATGATGGCCAACGTCAAGCTACAAAAGATGCAGG 9770 Query 550462 ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGC 550521 |||||| || | ||||||||||||||||| || || || || || || || |||| Sbjct 9771 TGTTATTGCAGGTTTGAATGTTCTTCGTATTATTAACGAGCCAACAGCAGCAGCTATTGC 9830 Query 550522 ATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGG 550581 | || | || || | |||| | |||| | |||| | || || ||| ||| || Sbjct 9831 TTTCGGCTTAAATGAAAAAGCTGATAATGAACGTCATGTTTTGATTTTCGATCTTGGTGG 9890 Query 550582 T 550582 | Sbjct 9891 T 9891 Score = 141 bits (156), Expect = 7e-28 Identities = 278/405 (69%), Gaps = 16/405 (4%) Strand=Plus/Plus Query 552205 GTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 |||| |||||||||| || || || |||||||| || ||||||| || || | | Sbjct 10370 GTGTCGATCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTTCAAGCCGCCATCATCAAGG 10429 Query 552265 GACAAACTGATGAAAAACTA-CAAA-ATATTGTACTTGTAGATGTTACTCCTCTATCTCT 552322 | | || || | || || |||| |||| | ||| | |||||| |||| || || || Sbjct 10430 GTGATAC--ATCAGAAGCTGTCAAAGATATCCTTCTTCTCGATGTTGCTCCACTTTCCCT 10487 Query 552323 TGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCC 552382 ||| | ||||||| ||| | || ||||| | | ||| ||||| | || ||||| Sbjct 10488 CGGTATCGAAACAGCTGGTGAAATCATGACAGTTTTGATCCCAAGAAACAAAACAATTCC 10547 Query 552383 TTGTAAAAAATCTCGTGTATTTTCTACGTATTCAG--ATAATCAAACTGCTGTTACAATT 552440 || ||||| | || || | || |||||| |||| ||| | |||||||||||| Sbjct 10548 AGCCAAGAAATCACAAGTCTTCACAAC--ATTCAGTGATAACCAACCAGCTGTTACAATT 10605 Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAAA----GATAATAATCAACTTGGTACTTT 552496 || ||| |||||| || | |||| || ||||| || | |||||||| || Sbjct 10606 AAAGTTTATGAAGGTGAGCG----TTCAAGAACACGTGATAACAACCTTCTTGGTACATT 10661 Query 552497 TAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGA 552556 | || | ||| ||||| || || || ||||| || || |||||||||||||| || || Sbjct 10662 TGATCTTACAGGAATTCCACCAGCACCACGTGGTGTCCCACAAATTGAAGTTACATTTGA 10721 Query 552557 TATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATC 552601 | | ||| |||| ||| |||| || ||||| |||||||| Sbjct 10722 CGTTAACGCCGATGGTATTATGAACGTTTCTGCTCAAGATAAATC 10766 >seq576 Length=101662 Score = 159 bits (176), Expect = 3e-33 Identities = 371/550 (67%), Gaps = 36/550 (7%) Strand=Plus/Minus Query 552054 AAAACAATTGAAC--CAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATC-CAAA 552110 |||| | || ||| || | ||||||||||||| ||| | || | |||| |||| Sbjct 10938 AAAAAACTTTAACAACAATTGAACAAGTTTTAAATGATGCTAATTTAACTAAAGATCAAA 10879 Query 552111 GTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTA 552170 || |||| ||||| | |||||||| |||||||||||||||| || | ||| | || Sbjct 10878 TTA-ATGATATTGTAATGATTGGTGGAAGTACAAGAATTCCTAAAGTTAGAGAATTAGTA 10820 Query 552171 AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCC 552230 |||||||||||| || ||||| | | | ||||||| || || || ||||| Sbjct 10819 TCAAATTATTTCAATGGAAAGAAATTGTGTACAGATATTAATCCTGACGAAGCAGTTGCT 10760 Query 552231 TATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAAT 552290 |||||||| ||||||||||| ||| || | || | | ||||| || || Sbjct 10759 TATGGTGCAGCAATTCAAGCTGCTGTTAT---------AAGTAAAGAAAACCT---GGAT 10712 Query 552291 ATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATG 552350 ||||| |||| |||||| ||| || | ||||| ||||||||||||| || || ||| Sbjct 10711 CTTGTAGTTGTTGATGTTTATCCACTGACACTTGGAGTAGAAACAGTTGGTGGGATCATG 10652 Query 552351 --ACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTA 552408 || || |||| |||||||||| || ||| ||||| | | | || | | | | Sbjct 10651 TCACCAA--TTATTCCAAGAAATACTAGAATCCCTGTTAAAAGAAGTAGAGTTTATACAA 10594 Query 552409 CGTATTCAGATAATCAAACTGCTGTTACA---ATTCAAATTTTTGAAGGAGAAAGAAAAT 552465 | || || || | |||||| || ||| |||| || ||||| ||||| |||| Sbjct 10593 CACAT---AATGATGATGCTGCTGGAGCACGTATTGAAATATTCGAAGGTGAAAGGAAAT 10537 Query 552466 TCACTAAAGATAATAATCAA---CTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTC 552522 |||| | | |||||| | ||||| | |||| | | | | |||| | || | Sbjct 10536 TCAC---ACGTGATAATCGAGTTCTTGGAATTTTTGAACTTCATCGACTTCCCCGCGCAC 10480 Query 552523 CTCGTGGAGTACC--GCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAA 552580 | | ||||| ||||| |||||||| || || |||||||| |||| ||||| | Sbjct 10479 AAAGAG--GTACCTTACAAATAGAAGTTACCTTTGAAATCGATGCTAATGCGATTTTAAC 10422 Query 552581 TGTGACTGCT 552590 || |||||| Sbjct 10421 AGTTACTGCT 10412 >seq1146 Length=32655 Score = 122 bits (134), Expect = 7e-22 Identities = 128/165 (78%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 563308 AGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGA 563367 ||||| || |||||| ||||| |||||| |||||| | ||| || ||||| || || Sbjct 29712 AGAGTATTTCCATCTTCGAGTTGCTTTCCGCTAAAAATTAATCTCTGTTGATCTGGTGGT 29653 Query 563368 ATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT--AC 563425 ||||||||||||||||||||||| ||||| || | |||| ||||| || |||| || Sbjct 29652 ATTCCTTCTTTATCTTGAATTTTGTGTTTCACATCGATAATTCTATCA-TGAGAGTTAAC 29594 Query 563426 ATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 | | ||||| ||| ||||||||||||||||| | ||| |||| Sbjct 29593 A-TAAAGAGTTACATGCTTACCAGTAAGAGTTTTGATGAATATTT 29550 >seq451 Length=115027 Score = 107 bits (118), Expect = 2e-17 Identities = 340/519 (66%), Gaps = 31/519 (6%) Strand=Plus/Minus Query 1046930 ATTTTACTGCATACAATGGTTTTGAACCAAGTGGAAGAATACATATTGCACAAGCACTTA 1046989 ||||| || |||||||| |||||||||||||| | || || || || ||||| || | Sbjct 43276 ATTTTCGAGCCTACAATGGATTTGAACCAAGTGGCCGTATGCACATCGCCCAAGCCCTCA 43217 Query 1046990 TTACAGTAATGAACACTAATACCATTATTCAAAATGGAGGATCAATGATTATATATATTG 1047049 | |||| || || || || | |||| | | ||| || | ||| | | || |||| Sbjct 43216 TGACAGCCATCAATACGAACGCTATTACTAAGGCTGGCGGTACTATGGTCCTCTACATTG 43157 Query 1047050 CTGATTGGTTTGCACAAATGAATCATAAAATGGGAGGTGATTTAGAAAAAATTAGAGATG 1047109 | ||| || || | |||||||||||||||| || ||| | | |||||| |||| Sbjct 43156 CCGATATTTTCGCGTTATTGAATCATAAAATGGGCGGCGATATTAACAAAATTCATGATG 43097 Query 1047110 TGGGTAAATATTTCATTGAAGTATTTAAAGCATGTGGTATTAATAT-GTCTGGCAC--TA 1047166 | || ||| ||||||||||| || || || ||||| || || | | | ||| Sbjct 43096 TCGGACTATACTTCATTGAAGTTTTCAAGGCCTGTGGAATGGATTTAGAC---CACGTCG 43040 Query 1047167 AATTTATCTGGGCTAGTGAATTTTTTAATGATAATGCTACAA----AATATTTTGAAAGA 1047222 | || || ||||| | || || | | || ||| ||| ||||||| || Sbjct 43039 AGTTCATTTGGGCCAAAGATTTCATCCAAGAAAAT----CAAGTCGAATATTT--CAATC 42986 Query 1047223 ATGT----TACATATTGCTAATCAGACATCTTTAGCACGTGCTAAAAGATGTTGTCAAAT 1047278 || |||| || | || | | ||| | || |||| | | |||||| Sbjct 42985 TCGTCAACAACAT-TTCCGCATTCGCTACACTTAAC-CGAATTAAACGTACTGTTCAAAT 42928 Query 1047279 TATGGGACGTAGAGAAGGTGATGAATTATCTTCGTCACAAATTATATATCCTTGTATGCA 1047338 |||||||| | ||||||||| | ||||| |||||| | || || || || ||||| Sbjct 42927 CATGGGACGAAAGGAAGGTGATAATTTATCCCTATCACAATTAATCTACCCCTGCATGCA 42868 Query 1047339 AGTAGCAGATATTTTTGAATTAAATCCAAATGGAATTGATATTTGTCAACTTGGTGTTGA 1047398 || || ||| || || | | |||| |||| | || ||||| |||||||| Sbjct 42867 AGCCGCCGATGTT------TTCATGCTCAATG---TTGACTTCTGCCAACTCGGTGTTGA 42817 Query 1047399 TCAAAGAAAAGTTAATATGTTAGCCATTGAATATGCTAA 1047437 || |||||||||| ||| | ||||| |||||||| || Sbjct 42816 CCAGCGAAAAGTTAACATGCTTGCCATCGAATATGCAAA 42778 >seq685 Length=78159 Score = 104 bits (114), Expect = 2e-16 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 361694 TTACTTCCAAGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACA 361753 || ||| | | |||||| |||| | |||||||||||| |||||||| || | || Sbjct 43831 TTCCTTTCTACACCATAGGCTAGGGCAGCAGCTGTTGGCTCGTTAATAATACGGGTTACG 43772 Query 361754 TTGAGTCCCGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATAT 361813 || | ||| || |||||| |||||| ||||| |||||||| | |||||| |||||| Sbjct 43771 TTCAATCCAGCGATTTTTCCAGCATCTTTCGTGGCCTGACGTTGAGAATCATTGAAATAT 43712 Query 361814 GCAGGAACAGTAATCACTGCTTTTT 361838 || ||||| |||||||| || |||| Sbjct 43711 GCTGGAACTGTAATCACGGCGTTTT 43687 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || || || || ||||||||||| ||||| || |||||||| || || ||||||||| Sbjct 43692 GCCGTGATTACAGTTCCAGCATATTTCAATGATTCTCAACGTCAGGCCACGAAAGATGCT 43751 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 ||| || |||||| | || || |||||||| || || || || |||||||| || Sbjct 43752 GGAAAAATCGCTGGATTGAACGTAACCCGTATTATTAACGAGCCAACAGCTGCTGCCCTA 43811 Query 550520 GCATATGG 550527 || ||||| Sbjct 43812 GCCTATGG 43819 >seq744 Length=68509 Score = 96.9 bits (106), Expect = 3e-14 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 552417 GATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGAT 552476 |||||||| | || || || ||| || ||| |||||| ||| || | || |||| Sbjct 36947 GATAATCAGTCAGCAGTCACGATTAAAGTTTATGAAGGCGAACGAGCAAAAACATGAGAT 36888 Query 552477 AATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCG 552536 |||||| | ||||||| ||| |||||| ||| ||||| || || | ||||| | || Sbjct 36887 AATAATTTATTTGGTACATTTGATTTAGCAGGAATTCCGCCAGCCACACGTGGTATTCCA 36828 Query 552537 CAAATTGAAGTTACTTTCGATATCGATGCCA 552567 |||||||||||||| |||||||| ||| || Sbjct 36827 CAAATTGAAGTTACATTCGATATTAATGGCA 36797 >seq476 Length=113956 Score = 96.9 bits (106), Expect = 3e-14 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 550343 GTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGC 550401 |||||| ||||||||| |||||||| ||| | |||| | | | ||| | | | || Sbjct 40245 GTTTTAGGAAAAATGAAAGAAACAGCCGAAACTTAT-TTGGGCGATACAGTCAAGAAAGC 40303 Query 550402 AGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGG 550461 || | || || ||||||||||| ||||| || || |||||||| || |||||||| || Sbjct 40304 CGTTGTTACAGTTCCAGCATATTTCAATGATTCTCAGCGTCAAGCCACAAAAGATGCCGG 40363 Query 550462 ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGC 550521 ||||| || ||| | || |||||| | || |||||||| || || || || || Sbjct 40364 TAAAATTGCCGGTCTTGAAGTCGAGCGTATTGTAAACGAACCTACAGCCGCCGCCCTCGC 40423 Query 550522 ATATGGACTTGA 550533 ||||| |||| Sbjct 40424 TTATGGCGTTGA 40435 >seq1455 Length=15174 Score = 93.3 bits (102), Expect = 3e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || ||||| ||| | ||||| |||| | |||||||| |||| ||||| ||||||||| Sbjct 2667 ATTGGTATCGATCTTGGAACTACATTTTCATGTGTTGGAGTTTTCCAAAAAGGTAAAGTT 2726 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 |||||||| ||||| || |||||| | | || ||||| |||||| |||| ||| Sbjct 2727 GAAATTATCGCCAACGAAGTTGGTAACCGTATCACACCATCAATTGTTTCATTCAATGAA 2786 Query 550115 ACTGAACATTTAGTTGGTGAT 550135 ||| ||| ||||||||| Sbjct 2787 GGACAACGTTTTGTTGGTGAT 2807 >seq816 Length=185453 Score = 93.3 bits (102), Expect = 3e-13 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 390807 ATTAATACCATTATCACCATATACACATTGAATTAATTTGTCATTGGCATTTCTTACGGT 390866 || |||||||| |||||||| | | ||| ||| | | |||| |||||||| || Sbjct 85300 ATCAATACCATCTTCACCATACAAAAATTCAATGATTGAATCATCACTGTTTCTTACAGT 85241 Query 390867 ACCATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACC 390926 ||||||||| | | | |||| |||| | ||||| | ||| || | ||| || Sbjct 85240 ACCATCATAGGCGGCGTGAATGCCTTCGATATGTTTAATGATGCATCTCTGTAAATATCC 85181 Query 390927 AGTGTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAA 390986 |||| |||||||||| ||||||| | | | ||||||||||||||||||| ||||| Sbjct 85180 TGTGTTGGCAGTTTTAACAGCAGTATCAGTGAGACCTTCTCTTCCTGCCATACAGTGGAA 85121 Query 390987 GAAAAATTC 390995 | | |||| Sbjct 85120 GTAGTATTC 85112 >seq132 Length=10111 Score = 91.5 bits (100), Expect = 1e-12 Identities = 121/167 (72%), Gaps = 1/167 (1%) Strand=Plus/Plus Query 720765 AAAAGCATAACAATATGATTTTTCTCCATCCCTTCCTGCACGACCAATTTCTTGATAATA 720824 || |||| ||||||| || || ||||| | || || |||||| ||||||||||||| Sbjct 5970 AACAGCA-AACAATAAGAACGTTGACCATCACGACCAGCTCGACCACTTTCTTGATAATA 6028 Query 720825 TCCTTCAATATTTTTAGGTGCACCATAATGTATAACTGCTCTCACATCACTTTTATTTAT 720884 | |||| | |||| || || |||||| || ||| ||||| ||||| || Sbjct 6029 TGCTTCTAAGCTTTTTGGCATTGTATGATGTATTACAAATCTAACATCCGGTTTATCAAT 6088 Query 720885 TCCCATTCCAAAAGCAATCGTCGCAACCATAACTTTAACTTTACCAG 720931 |||||||||||| || || || ||||| || || | || |||||||| Sbjct 6089 TCCCATTCCAAATGCCATTGTTGCAACAATGACGTGAATTTTACCAG 6135 >seq1067 Length=33406 Score = 89.7 bits (98), Expect = 4e-12 Identities = 265/405 (65%), Gaps = 16/405 (4%) Strand=Plus/Minus Query 552205 GTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 |||| |||||||||| || || ||||| ||||| || | ||||| || || | | Sbjct 10386 GTGTCGATCCAGATGAAGCCGTCGCCTACGGTGCTGCCGTCCAAGCCGCCATCATCAAGG 10327 Query 552265 GACAAACTGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTCTATCTCT 552322 | | || || | || | || |||| | ||| | |||||| |||| || || || Sbjct 10326 GCGANAC--ATCAGAATCCGTCAAGGATATCCTTCTTCTCGATGTTGCTCCACTTTCNCT 10269 Query 552323 TGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCC 552382 ||| | ||||||| ||| | || ||||| | | ||| ||||| || || || || Sbjct 10268 CGGTATCGAAACAGCTGGTGAAATCATGACAGTTTTGATCCCAAGAAACACAACAATCCC 10209 Query 552383 TTGTAAAAAATCTCGTGTATTTTCTACGTATTCAG--ATAATCAAACTGCTGTTACAATT 552440 || || || | || || | || |||||| |||| || | ||||||||||| Sbjct 10208 AGCCAAGAAGTCCCAAGTCTTCACAAC--ATTCAGCGATAACCANCCAGCTGTTACAATC 10151 Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAA----AGATAATAATCAACTTGGTACTTT 552496 | ||| ||||| ||| | |||| || ||||| || | |||||||| || Sbjct 10150 AAGGTTTACGAAGGTGAACG----TTCAAGAACACGTGATAACAACCTTCTTGGTACATT 10095 Query 552497 TAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGA 552556 | | ||| || || || || || ||||| || || ||||| |||||||| ||||| Sbjct 10094 CGACCTTACAGGAATCCCACCAGCACCACGTGGCGTCCCACAAATCGAAGTTACATTCGA 10035 Query 552557 TATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATC 552601 | | ||| |||| || |||| || |||| |||||||| Sbjct 10034 CGTTAACGCCGATGGTATCATGAACGTTTCTGCCCAAGATAAATC 9990 >seq1271 Length=144463 Score = 87.8 bits (96), Expect = 1e-11 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 367555 TGGATTGACGTAAAAAATGAATATAAAACAATGGATACTAATTTCATGGAATCTGTTATT 367614 |||||||| | |||| ||| || ||||||||| || ||||||||||| | Sbjct 56880 TGGATTGATTTTGAAAACTCATACAAGACAATGGATGTTACATTCATGGAATCAATCTGG 56939 Query 367615 TGGGCATTTAAACAATTATACGAACGCGGTATGATTTTTGAAGGTTATAAAGTAATGCCA 367674 |||| ||| |||||||||| ||||||| | | ||| | || ||||| |||||| Sbjct 56940 TGGGTATTCAAACAATTATGGGAACGCGATTTCGTTTATCGTGGCGTCAAAGTTATGCCA 56999 Query 367675 TATTCAACTGGTTGTAATACTGCTTTGTCACATTTTGAAGCCAAACAAAATTATCGAGAA 367734 || ||||| || || || || ||| | ||| | || |||||| |||| |||| | || Sbjct 57000 TACTCAACAGGATGCAAGACAGCTCTTTCAAACTTCGAAGCCGGTGAAAACTATCAACAA 57059 Query 367735 GTAGTTGATCCAT 367747 || ||||||| Sbjct 57060 GTTAGCGATCCAT 57072 >seq665 Length=81668 Score = 86.0 bits (94), Expect = 5e-11 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 720773 AACAATATGATTTTTCTCCATCCCTTCCTGCACGACCAATTTCTTGATAATATCCTTCAA 720832 |||| |||||| || ||||| |||||||| | ||| ||||||||||||| |||||| Sbjct 8351 AACAGTATGATCTTAAACCATCTCTTCCTGCTCTTCCACTTTCTTGATAATAGGCTTCAA 8410 Query 720833 TATTTTTAGGTGCACCATAATGTATAACTGCTCTCACATCACTTTTATTTATTCCCATTC 720892 | |||| || || ||| || || | |||| ||||| |||||||||| Sbjct 8411 TGCTTTTCGGAATTGTATGATGAATGACAAAACGAACATTTGGTTTATCAATTCCCATTC 8470 Query 720893 CAAAAGCAATCGTCGCAACCATAACTTTAACTTTACC 720929 ||||||| | || ||||| ||||| |||| || ||| Sbjct 8471 CAAAAGCTAAAGTTGCAACAATAACATTAATTTCACC 8507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029217730925200