Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq769 95.1 1e-14 >seq769 Length=64858 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 153406 TCGTGCAGTTGCAAACGTGAATATTCTGGAAGGCATTCGTTTCTATGTTTCCTTCGCCTG 153465 || |||| ||| ||| ||||| ||||| ||||| ||||||||||| ||||| ||||| || Sbjct 8722 TCTTGCACTTGTAAATGTGAACATTCTTGAAGGAATTCGTTTCTACGTTTCTTTCGCATG 8663 Query 153466 TTCTTTTGCTTTCGGTGAGAACAAACTTATGGAAGGTTCTGCAAAGATTCTTTCTCTAAT 153525 |||||||| |||||||| || ||| | |||| || |||| || || || || Sbjct 8662 CTCTTTTGCATTCGGTGAAAATAAATTAATGGTTGGAAATGCATCAATCATTAAGCTCAT 8603 Query 153526 TGCTCGTGATGAATCACAACACCTTGTTCT 153555 || |||||||| ||||| || |||| Sbjct 8602 CGCAACTGATGAATGTCAACATCTCATTCT 8573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547737066676800