Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq769 84.2 2e-11 >seq769 Length=64858 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 152104 TCGTGCAGTTGCGAATGTGAATATCCTTGAGGGTATTCGTTTCTACACATCATTTGCATG 152163 || |||| ||| |||||||| || ||||| || |||||||||||| || || ||||| Sbjct 8722 TCTTGCACTTGTAAATGTGAACATTCTTGAAGGAATTCGTTTCTACGTTTCTTTCGCATG 8663 Query 152164 TTCATTTGCTTTCGGTGAGAACAAACTTATGGAAGGTAGTGCAAAGATCCTTTCATTGAT 152223 || ||||| |||||||| || ||| | |||| || | |||| ||| || | || Sbjct 8662 CTCTTTTGCATTCGGTGAAAATAAATTAATGGTTGGAAATGCATCAATCATTAAGCTCAT 8603 Query 152224 TGCCCGTGATGAATCACAACACCTTGTACTTACTCA 152259 || |||||||| ||||| || | ||| |||| Sbjct 8602 CGCAACTGATGAATGTCAACATCTCATTCTTTCTCA 8567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548364255073600