Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq788 86.0 6e-12 >seq788 Length=62525 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || ||||| |||||||| ||| | ||||| || || || || || ||||| ||||||||| Sbjct 15204 TCTTCGAGTTGCTTGCCAGCGAAGATGAGACGTTGTTGATCTGGTGGGATACCTTCCTTG 15263 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | || || || || || |||| |||| | Sbjct 15264 TCTTGGATCTTGGCCTTGACGTCTTCGATACGATCAGTTGGTTCGACTTCGAGTGTGATG 15323 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||||||| || || || |||||||| ||||| Sbjct 15324 TGTTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 15358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483411856715200