Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq827 84.2 5e-11 >seq827 Length=184754 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || ||||| || || || |||||| ||||||| ||| | ||| Sbjct 148857 CAGATCTTTGTGAAGACGCTGACTGGGAAGCACATCACTCTGGAAGTTGAACCAACAGAC 148916 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | |||| || ||| || || ||||| || ||||||||| || || ||| Sbjct 148917 AGAATCGAGGACGTCAAGGCCAAAATCCAAGACAAGGAAGGAATTCCACCAGATCAACAA 148976 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | |||||||||||||| || |||||||| |||| || | |||||| || Sbjct 148977 CGTTTGATCTTCGCCGGAAAACAATTGGAAGACGGAAACACCCTCCAAGATTACTCAATC 149036 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || ||||| || ||||| |||||||| Sbjct 149037 CAAAAAGATTCAACTCTCCACCTTGT 149062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181798389723080