Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_028780.1 Length=167124 Score E Sequences producing significant alignments: (Bits) Value seq712 82.4 8e-11 >seq712 Length=73840 Score = 82.4 bits (90), Expect = 8e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 23067 GGAATTCGTGGTGGCGCTGCTACTGCTTATTATCCTATTTGGCATTTGGAAGTTGAAAAT 23126 ||| |||| ||||| | | |||| || | ||| ||||||||| |||||| ||| | Sbjct 55450 GGAGTTCGAGGTGGAGGAGGTACTATTTCCTTCCCTTTTTGGCATTGGGAAGTCCAAACT 55391 Query 23127 CTTCTCGTTTTGAAAAATAACAAAGGTGTAGAAGAAAACCGCATTCGTCATATGGATTAT 23186 ||||| | ||||||||||| ||||| || | ||||||||| |||| | |||||||| Sbjct 55390 CTTCTTGAATTGAAAAATAATAAAGGAGTGGCAGAAAACCGAGTTCGAAGTTTGGATTAT 55331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534658908627200