Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_031085.1 Length=166634 Score E Sequences producing significant alignments: (Bits) Value seq712 86.0 7e-12 >seq712 Length=73840 Score = 86.0 bits (94), Expect = 7e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 140493 ATAATCCATATGACGAATGCGGTTTTCTTCTACACCTTTGTTATTTTTCAAAACAAGAAG 140552 |||||||| | |||| ||||||||| | || ||||| ||||||||||| ||||||| Sbjct 55331 ATAATCCAAACTTCGAACTCGGTTTTCTGCCACTCCTTTATTATTTTTCAATTCAAGAAG 55390 Query 140553 ATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGAATTCC 140612 | ||| |||||| ||||||||| ||| | || |||| | | || || |||| ||| Sbjct 55391 AGTTTGGACTTCCCAATGCCAAAAAGGGAAGGAAATAGTACCTCCTCCACCTCGAACTCC 55450 Query 140613 ACCTT 140617 | ||| Sbjct 55451 ATCTT 55455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533090937635200