Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq769 87.8 2e-12 >seq769 Length=64858 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 154438 AATGTCTACATCCTTGAGGGAATTAGATTTTACGTCTCGTTTGCTTGCTCTTTCGCATTC 154497 ||||| |||| ||||| |||||| | || ||||| || || || |||||||| |||||| Sbjct 8709 AATGTGAACATTCTTGAAGGAATTCGTTTCTACGTTTCTTTCGCATGCTCTTTTGCATTC 8650 Query 154498 GGGGAACTTAAACTTCTGGAAGGAAGTGCTAAAATTATCGGGCTCATCGCAAGAGACGAA 154557 || ||| |||| | ||| |||| ||| ||| || ||||||||||| || ||| Sbjct 8649 GGTGAAAATAAATTAATGGTTGGAAATGCATCAATCATTAAGCTCATCGCAACTGATGAA 8590 Query 154558 AGTCAACA 154565 ||||||| Sbjct 8589 TGTCAACA 8582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596296168316800