Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1164 96.9 4e-15 >seq1164 Length=31805 Score = 96.9 bits (106), Expect = 4e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 64426 TGATGTTATTGGAATTGATGAAGGGCAATTTTTTACTGATATAGTTGAATTTTCTGAAAA 64485 |||||||||||| ||||||||| |||||||| | ||| | |||||||||||||||| Sbjct 10338 TGATGTTATTGGTGTTGATGAAGCACAATTTTTCTCGGATGTCGTTGAATTTTCTGAAAG 10279 Query 64486 TATGGCCAATAAAGGAAAAATTGTAATTGTTTCAGCGTTAGATGCGACATATAAAAGAGA 64545 | || || || ||||| |||| || ||| ||| | |||| |||| | | ||| | Sbjct 10278 GTTAGCAAACAATGGAAAGGTTGTTATCGTTGCAGGCCTCGATGGAACATTTCAGAGAAA 10219 Query 64546 ACCATTTGGTAATATCCTAAATCTAGTT 64573 |||||| || |||| | |||||| || Sbjct 10218 ACCATTCGGCCATATTTTGAATCTAATT 10191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521478352472000