Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq582 86.0 5e-12 >seq582 Length=225330 Score = 86.0 bits (94), Expect = 5e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || |||| || || || ||||| ||||||||||| ||||| | ||| | |||||||| Sbjct 127296 TCCTCCAATTGTTTTCCTGCAAATATCAAACGCTGTTGATCAGGAGGAATTCCTTCCTTA 127237 Query 44243 TCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAAT 44301 ||| ||||| ||| | || | | ||| || | || || ||||| | |||||| Sbjct 127236 TCCTGGATCTTAGCCTTGAC-GTCCTCAATGCGATCTGTGGGCTCGACCTCAAGCGTAAT 127178 Query 44302 CGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || || |||||||||||||||||||| Sbjct 127177 ATGCTTTCCGGTCAGAGTCTTCACGAAGATTTGCAT 127142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359983906673160