Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02- 24] 1,683 sequences; 26,819,972 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1604 188 2e-44 >seq1604 Length=19511 Score = 188 bits (208), Expect = 2e-44 Identities = 373/549 (68%), Gaps = 21/549 (4%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || || || ||||| || ||| ||||| | || | || |||||||| || || Sbjct 5596 GGGACAACGGCAGCAACTGTCAGTCGCGTGAGGGCATTGTATGACTTCACTCCTAGCGAG 5655 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || || || | || || ||||| |||||| ||||| |||||||||||||| ||||| Sbjct 5656 CCTGGAGAACTAGCGTTTCGCAAGAACGACATAATTGCCGTTCTCGAGTCTGTCTACAAA 5715 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 || ||||||||||| ||| | || || || || || |||||||| || ||||| ||| Sbjct 5716 GATTGGTGGAAGGGAAGTCTCAGAGGGCAAACTGGTATTTTCCCCCTAAATTATGTTGAG 5775 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 || |||| || || || || ||||| | ||| | || || |||||||| || ||||| Sbjct 5776 AAATTGCAAGACCCAACGAAAGAGGAATTGGAGCGGGATGCGCAGATGGAAGCCGAAGTA 5835 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAG-TTCGA--GT 668 || | ||||||||||| ||||| || || || || ||||||||| || ||| || Sbjct 5836 TTCGGCGAGATCAAGAATGTGGAAAAACTTCTCGCGCTGCTGAGCGTAAGAGGCGAGGGT 5895 Query 669 GCCGACGCT---------------AGGGACAATGAGGAGATCACTTCGCTGTACCACAAG 713 | || | | || || | ||||| || || ||| || || | Sbjct 5896 GGCGGGGGTGGGAGGAGGGGAGAAAGAGAAGAGGAGGAAATTGCTGAGCTTTATCAGCGG 5955 Query 714 ACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGT 773 || || || || ||||| |||| ||| | ||||| ||||||||||| ||||| ||| Sbjct 5956 ACTTTGAGCATCCGACCGAAACTGATTGAGTTGATTGGAAAGTATTCGCAGAAGAAAGGT 6015 Query 774 AAGTGGAATCTTTTACG-CGAATTTGTGTGTTGGCCACTGATCGT-GTTCCAGATGATTT 831 || |||| | | | | | | || || |||||| | ||| |||| ||||| Sbjct 6016 GAGACGAAT-TCTGATGTCAACGCTGGAGAATGCTTACTGATGATCGTTACAGACGATTT 6074 Query 832 CACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGC 891 || | || ||||||||||||||||| ||||| ||||| |||| || || || | Sbjct 6075 TACATCCTTAAATGAGAAGTTCATCAAGGCCCGCCGTGACTATGAAAATCTGCTCGAGTC 6134 Query 892 CTCGATGTC 900 || ||||| Sbjct 6135 ATCCATGTC 6143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945306476385