Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01] 547 sequences; 33,016,309 total letters Query= NC_006019.1 Length=1169 Score E Sequences producing significant alignments: (Bits) Value seq220 333 2e-88 >seq220 Length=278 Score = 333 bits (368), Expect = 2e-88 Identities = 223/249 (90%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 731 CAACTTATTTACTGTAGATAAATCATTGCTTAAGCGGGGTGGGTTAGGGAGGGAAGACAT 790 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct 11 CAACTTATTTACTGTAAATAAATCATTGCTTGAGCGGGGTGGGTTAGGGAGGGAAGACAT 70 Query 791 TCTACATCAATCAGATATTGTAAAAGAGATTAGAGCAAGCGATAAAAAAGTCAAGATTAT 850 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 71 TCTACATCAGTCAGATATTGTAAAAGAGATTAGAGCAAGTGATAAAAAAGTCAAAATTAT 130 Query 851 TCCTCTTTCCACAGTAAAGAGAATGATAGCGGAATTCGGAGGAACAGAGGAGGATGAAAT 910 ||||||||| ||||| |||| |||||| | |||||||||| || |||||||||| || || Sbjct 131 TCCTCTTTCTACAGTGAAGATAATGATGGAGGAATTCGGATGAGCAGAGGAGGAGGATAT 190 Query 911 CAAAGCTGTTCAAACTCAAAGTTCTTCTATCAGGTATATTAGTAATAGAATGGAAGATGT 970 |||||||||| ||| ||| || |||||||| || |||||||||| |||||||| | |||| Sbjct 191 CAAAGCTGTTGAAATTCATAGCTCTTCTATGAGTTATATTAGTATTAGAATGGGATATGT 250 Query 971 TTCAAGAGC 979 | ||||| Sbjct 251 TGGTAGAGC 259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3635179494064