Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01]
547 sequences; 33,016,309 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq17 430 4e-117
>seq17
Length=296578
Score = 430 bits (476), Expect = 4e-117
Identities = 659/933 (71%), Gaps = 50/933 (5%)
Strand=Plus/Minus
Query 2 GCAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAA 61
|||| ||||||| ||||| || ||||| |||| || ||||| | |||||||| || |
Sbjct 149358 GCAGGTCAAGGCGAAGATACTGGAGCGCATGGCCGAGTGGACCAACATGTTCGCTAGCGA 149299
Query 62 CCCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGA 121
|| || || || |||||| |||||| || ||| ||| |||||||| ||| ||
Sbjct 149298 TCCCGACCTGGGAATCATGTCTGGCGCCTATCAGAAGCTCAAGTCACAAAGTACGTTGGA 149239
Query 122 T------CAACTCTG-GTTCGTTGGGAGCACTGACCAACGTGTTGTAGACCCTAACCTGC 174
|| | ||| | |||| | ||| || |||||| |||||||
Sbjct 149238 GAGGTACCAGCACTGCGCATGTTG----------CTAACAAGTCTCAGACCCCAACCTGC 149189
Query 175 GACCTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGG 234
|| | || || || || || ||||| |||||| | ||| |||||||| |||||||| |
Sbjct 149188 GAGCGCCCTCCAAGCCACAAAAGACGCAGATCTCTGACGTCGACCGCCAAAAGGAAGAAG 149129
Query 235 AGGAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAAAGC-----GGGACCGAGCCATC 289
|||||||||| |||||||| || | || | | || || || ||| ||| |
Sbjct 149128 AGGAGCTACAAATGGCGCTTGCCATGTCGAT--ACGAGAGTCCAAAGGCGCCGCACCAAC 149071
Query 290 CGCCGCCAGGTCCAA---CCAGCCGCAAGCAAAAGC--CCCACAACAATCCGCCCCGGAA 344
|| |||| |||||| || | ||| | | | | | || | || |||| |||
Sbjct 149070 GGCTGCCAAGTCCAATACCCCTCAGCAGGGCGGATCTGCTCCCAGCGCTCAGCCC--GAA 149013
Query 345 CAAGAGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGC 404
|| || |||| | | | || || || || || || |||||||| ||||| ||
Sbjct 149012 CA---GCCCTCTCAACCCCTACCGTCAGGCACAACTGCGGCAACCGTCTCACGCGTGCGA 148956
Query 405 GCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATT 464
||||| | |||||| ||| ||||| ||||| || | |||||||| ||||||||
Sbjct 148955 GCCCTCTTCGACTTTCAGCCATCGGAGCCCGGTGAACTACAGTTCCGCAAGGGCGACATC 148896
Query 465 ATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACC 524
|| ||||| ||||| || ||||||||||| ||||||||||| || || ||||| |||||
Sbjct 148895 ATCGCGGTCCTCGAATCAGTGTACAAGGATTGGTGGAAGGGATCGCTACGTGGGCAGACA 148836
Query 525 GGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAG 584
|| |||||||| || ||||| || |||||| |||| ||||| || |||||||| |||
Sbjct 148835 GGTATCTTCCCGCTAAACTACGTGGAGAAGTTGCAAGATCCGACACGCGAGGAGCTTGAG 148776
Query 585 AGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTA 644
|||||||| |||| ||||| || || || || | || | ||||||||||||| | ||
Sbjct 148775 AGAGAAGCACAGAATGAGGCTGAGGTATTCGCACAAATAAGGAACGTGGAGAAGTTACTG 148716
Query 645 GCTCTGCTGAGCACTAGTTC---------GAGTGCCGACGCTAGGGACAATGAGGAGATC 695
|| || |||||||||||||| ||| ||| || | ||||| |||||||||
Sbjct 148715 GCACTCCTGAGCACTAGTTCACAGCCAGGTGGTGGCGATGCGCGAGACAACGAGGAGATC 148656
Query 696 ACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAG 755
|| ||| |||||| ||| | | || |||||||||||||| ||||||||||| |||
Sbjct 148655 ACAGAGCTATACCACTCGACGCTAGCCATCCGGCCGAAGTTGATTGAGCTCATTGGAAAG 148596
Query 756 TATTCGCAAAAGAAGGGTAAGTGGAATCTTTTACGCGAATTTGTG-TG-TTGGCCACTGA 813
|| || |||||||||||||||| || | | || | || || || | || ||||
Sbjct 148595 TACTCACAAAAGAAGGGTAAGTCCAA---TATGAGCAGAGTTATGATGATCAGCGGCTGA 148539
Query 814 TCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTA 873
| | ||||||| || || ||| | |||||||||||||||||||| ||||| |||||
Sbjct 148538 --CTTTAGCAGATGACTTTACACAGTTGAACGAGAAGTTCATCAAGGCTCGCCGAGACTA 148481
Query 874 CGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906
|||| || | || ||||| || ||||| |||||
Sbjct 148480 CGAAGCCATGCTGGAAGCATCCATGTCCCAACC 148448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945504600465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |