Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq480 145 2e-31 >seq480 Length=190759 Score = 145 bits (160), Expect = 2e-31 Identities = 374/566 (66%), Gaps = 24/566 (4%) Strand=Plus/Minus Query 362 TATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCAC 421 |||| | ||||| || || || ||||| || || || ||||| || | ||||| ||| Sbjct 49372 TATTCCCTCTGGTACGACTGCTGCTACAGTATCTCGTGTTCGTGCGTTGTACGATTTCCA 49313 Query 422 GCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTC 481 || || |||||||| || | ||||| |||||||| || || || || | || || Sbjct 49312 ACCGTCAGAACCCGGAGAACTTCAATTCCGAAAAGGCGATATCATAGCCGTGTTGGAATC 49253 Query 482 TGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAA 541 ||| || || ||||||||||| || || || | || ||| |||||| || || | || Sbjct 49252 TGTTTATAAAGACTGGTGGAAAGGCTCACTAAGGGGTCAGGTCGGCATATTTCCGTTAAA 49193 Query 542 CTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGA 601 || || || || || ||||| || |||||||| | || |||| || || ||||| Sbjct 49192 TTACGTAGAAAAACTCTCAGATCCAACTCAGGAGGAGTTGCAGCGAGAGGCCCAAATGGA 49133 Query 602 GGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAG 661 || || || || || || || || || ||||| ||||| | ||||| |||| || || Sbjct 49132 AGCCGAGGTATTCGCTGAAATAAAAAATGTGGAAAAGCTTTTGGCTCTCTTGAGTACCAG 49073 Query 662 TTCGAGTGCCG------ACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGAC 715 || ||| | | || || || || || || | || ||| || Sbjct 49072 ---CAGCCCCGAATTGAATGTCCAAGAAAACGAAGAAATTACCAAATTATATCACTCCAC 49016 Query 716 AGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAA 775 | |||| || || ||| | || ||||| || ||||| ||||| | ||||||||| | Sbjct 49015 GCTTGCGATTCGACCAAAGCTAATAGAGCTAATCGGCAAATATTCCAAGAAGAAGGGTGA 48956 Query 776 GTGGAATCTTTTACGCGAATTTGT-GTGTTG----GCCACTGATCGTGTTC-CAGATGAT 829 | |||| || ||| || ||||| | | | | | || || |||||||| Sbjct 48955 G------GTTTT---CGTATTGGTAATGTTGGAGTGGCTGTTAACATGCTCACAGATGAT 48905 Query 830 TTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAA 889 || || || ||||||||||| || || ||||| || | || || ||| | | | ||| Sbjct 48904 TTTACTCAACTCAACGAGAAATTTATAAAGGCTCGGAGAGATTATGAAGCGTTATTAGAA 48845 Query 890 GCCTCGATGTCGCAACCAGCGCAGCC 915 | || ||| | || ||||| || || Sbjct 48844 GTATCTATGACCCATCCAGCACAACC 48819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945063704625