Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq234 488 2e-134 >seq234 Length=72641 Score = 488 bits (540), Expect = 2e-134 Identities = 696/966 (72%), Gaps = 54/966 (6%) Strand=Plus/Minus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||||| ||||||||||| |||||||| || ||| |||| |||||| || || | || | Sbjct 2240 TCAAGGCCAAGATCCTCGAACGTATGGGAGAGTGGTCGGACATGTTCTCCCGTGATCCAG 2181 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGATCAAC 126 | || ||||||||| || ||||| | | ||| ||| | || |||| || || | Sbjct 2180 ACCTCGGCATCATGCAGGGCGCCTACAACAAGCTGAAGTCGCAGAGTGAGT-TGC----C 2126 Query 127 TCTGGTTCGTTGGGAGCACTG-ACCA--ACG-TGT----TGTAGACCCTAACCTGCGACC 178 | ||| | | | |||| |||| ||| || | ||| || || |||||| | Sbjct 2125 T-TGG--CAT---GCGCACGATACCATGACGCTGACACATCCAGATCCCAATCTGCGAGC 2072 Query 179 TCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGA 238 || |||||||| || ||||| |||||| | || | |||||||||||||| |||||||| Sbjct 2071 ACCTTCGAAACCACAAAAGACGCAGATCTCCGATACCGACCGCCAGAAGGAGGAGGAGGA 2012 Query 239 GCTACAGATGGCGCTGGCACTCTCCGTCAAGGA----AAGCGGGACCGAGCCATCCGCCG 294 | | |||||||||||||| | || | || ||| || ||| || || ||| Sbjct 2011 GTTGCAGATGGCGCTGGCCATGTCGATACGAGAGTCCAAG-GGCTCCGCCCCTGCCACCG 1953 Query 295 CCAGGTCCAA-------CCAGCCGCAAGCAAAAGCCCCACAACAATCCGCC--CCGGAAC 345 ||| ||| || | || ||||||| | || ||| | | | | || | || Sbjct 1952 CCAAGTCGAATGCTCCTCAAGACGCAAGCGCAGGCGCCAGCTCCAGCGCACAGCCTGCAC 1893 Query 346 AAGAGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCG 405 | | | | | ||| || |||||||| ||||| || ||||| || || |||| Sbjct 1892 AGGCCCCGGCGCCAGCAC---CACAAGGAACCACCGCAGCAACTGTCTCGCGAGTACGCG 1836 Query 406 CCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTA 465 || | ||||||||| ||| ||||||||||||||| || ||| || |||||||| | Sbjct 1835 CCTTGTACGACTTCCAGCCTTCGGAACCCGGCGAGCTGCAGTTCAAAAAGGGCGACATCA 1776 Query 466 TTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCG 525 ||||||| |||||||| ||||||||||||||||||||||| || |||||||||||||||| Sbjct 1775 TTGCGGTACTCGAGTCGGTGTACAAGGACTGGTGGAAGGGCTCGCTGCGTGGACAGACCG 1716 Query 526 GCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGA 585 |||| ||||| |||||||| ||||||||||||||||| || || |||||| | |||| Sbjct 1715 GCATTTTCCCTCTCAACTACGTCGAGAAGCTGCAGGACCCCACACGAGAGGAGTTGGAGA 1656 Query 586 GAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAG 645 | || || ||||||||||| || ||||||||| |||| ||||||||||||||||| | Sbjct 1655 GGGAGGCACAGATGGAGGCAGAGGTCTTTGCGCAGATTCGAAACGTGGAGAAGCTGCTCG 1596 Query 646 CTCTGCTGAGCACTAGTTC------GAGTGCCGACGCTAGGGACAATGAGGAGATCACTT 699 | ||||| ||||| || || | | ||||| | ||||||| ||||||||||| Sbjct 1595 CGCTGCTCAGCACAAGCTCACAAGGCGGAGGCGACGTTCGGGACAACGAGGAGATCACAG 1536 Query 700 CGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATT 759 ||| |||||| ||| | | || |||||||| |||||||||| ||||||||||| | Sbjct 1535 AGCTCTACCACTCGACGCTAGCCATCAGGCCGAAGCTGATCGAGCTGATTGGCAAGTACT 1476 Query 760 CGCAAAAGAAGGGTAAGTGGAATCTTTTACGCGAATTT--GTGTGTTGGCCACTGATCGT 817 |||| |||||||||| || || | |||| || | ||||||| | Sbjct 1475 CGCAGAAGAAGGGTAGGT------TTGTCCGCGCGCTTACCACAGACTACCACTGA-CCA 1423 Query 818 GTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAA 877 | |||| || ||||| || || || |||||||||||||||| ||||| ||||||||| Sbjct 1422 GCATCAGACGACTTCACACAACTGAATGAGAAGTTCATCAAGGGCCGCCGTGACTACGAA 1363 Query 878 ACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTA---CGGTCGTCAACCC 934 | || ||||| || |||||| | || |||| ||||| | || ||| |||| | || Sbjct 1362 TCGCTACTTGAGGCTTCGATGACACAGGCAGCACAGCCGGCATACGGCGGCCGTCCAGCC 1303 Query 935 TATGGC 940 |||||| Sbjct 1302 TATGGC 1297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945541051110