Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq4 394 3e-106 >seq4 Length=4068578 Score = 394 bits (436), Expect = 3e-106 Identities = 661/938 (70%), Gaps = 41/938 (4%) Strand=Plus/Plus Query 3 CAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAAC 62 ||| ||||| | |||||||| || || ||| ||||||||||||||||||||||||||| Sbjct 2961610 CAGGTCAAGTCGAAGATCCTAGAACGCATGCAGGAATGGACGGAGATGTTCGCCAGTAAC 2961669 Query 63 CCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTG--TG 120 || ||| | || |||||||| || || || |||| ||| ||||| || ||| ||| | Sbjct 2961670 CCGGATTTCGGAATCATGGAACAAGCTTACATGAAGCTGAAGACTCAGAGTAAGTGCTTT 2961729 Query 121 ATCAACTCTGGTTCGTTGGGAGCA-CTGACCAACGTGTTGTAGACCCTAACCTGCGACCT 179 | || | ||| | || | ||| | || || | || ||||||| ||||||| ||| Sbjct 2961730 AGCAGTTATGGATAGTGGAGAGAAGCTCACTA-----TTTTAGACCCGAACCTGCAGCCT 2961784 Query 180 CCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAG 239 |||||||| || ||| | ||||| || || || ||||| ||||||||||||||| Sbjct 2961785 CCGTCGAAGCCCGGAAAGCGGGAAATCACCGATTCAGATCGCCAAAAGGAAGAGGAGGAG 2961844 Query 240 CTACAGATGGCGCTGGCACTCTCCGTCAAGGAAAGCGGGACCGAGCCATCCGCCGCCAGG 299 || || ||||| || ||||| || | | |||| | || || | ||| || | Sbjct 2961845 CTGCAAATGGCCCTTGCACTGTCGATAAGAGAAAAGGCCAC-GA-----CTGCC-CCTGC 2961897 Query 300 TCCAACCAGCC----GCAAGCAAAAGCCCCACAACAATCCGCC----CCGGA-ACAAGA- 349 |||| ||||| || ||| || | | || ||| || || || || | Sbjct 2961898 TCCA--CAGCCCGAGGCCAGCTCCAGTGCTGCTCCAGTCCACCAAAACCAGACACCTGCT 2961955 Query 350 GCAGCATC--AAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCC 407 || | || | || | | || || || | || || || ||||| ||||| | ||| Sbjct 2961956 GCCACGTCCCAGGCCGTCCCCTCGGGTACTTCTGCCGCCACAGTCTCGCGCGTGAGAGCC 2962015 Query 408 CTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATT 467 || | |||||| ||| ||||||||||| || || |||||||| || || | || Sbjct 2962016 CTGTTCGACTTTCAGCCTTCGGAACCCGGTGAACTGCAGTTCCGCAAGGGAGATGTCATC 2962075 Query 468 GCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGC 527 || |||||||||||||| |||||||| |||||||||||||| || | || ||||||||| Sbjct 2962076 GCTGTTCTCGAGTCTGTCTACAAGGATTGGTGGAAGGGTTCCTTGAGAGGCCAGACCGGC 2962135 Query 528 ATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGA 587 ||||| ||||| ||||| |||||||| || | || || || ||||||| | || | Sbjct 2962136 ATCTTTCCCCTTAACTACGTCGAGAAACTTCCAGACCCGACGGTGGAGGAGTTGCAGCGG 2962195 Query 588 GAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCT 647 ||||| |||||||| || || || |||| |||||||||||||||||||| || | | Sbjct 2962196 GAAGCCCAGATGGAAGCCGACGTGTTTGGTCAGATCAAGAACGTGGAGAAGTTGTTGACC 2962255 Query 648 CTGCTGAGCACT---AGTTCGAGTGCCG-ACGCTAGGGACAATGAGGAGATCACTTCGCT 703 || ||||||||| || || | || | | | |||||||||||||||||| | | Sbjct 2962256 CTTCTGAGCACTCGCAGCTC-CGAGCTGAATGTGCAGGACAATGAGGAGATCACGGCATT 2962314 Query 704 GTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCA 763 ||||||| ||| || | || || || ||| |||||||||||||||| ||||| ||||| Sbjct 2962315 GTACCACTCCACATTGGCCATTCGCCCCAAGCTGATCGAGCTCATTGGGAAGTACTCGCA 2962374 Query 764 AAAGAAGGGTAAG---TGG--AATCTTTTACGCGAATTTGTGTGTTGGCCACTGATCGTG 818 |||||||||||| | | | || ||| | || | | || || | | Sbjct 2962375 GAAGAAGGGTAAGATTTCGACACTCCATTAAG-TTCTTCCCTTCCTCTCCGCT-AACACT 2962432 Query 819 TTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAA 878 || |||| || ||||| |||||||| || |||||||||||||| || | || ||||| Sbjct 2962433 TTGCAGACGAGTTCACACAGCTCAATGAAAAGTTCATCAAGGCGCGGAGGGATTACGAGT 2962492 Query 879 CCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCC 916 | || || || || || ||| |||| || || || ||| Sbjct 2962493 CTCTGCTGGAGGCGTCCATGGCGCACCCCGCACAACCC 2962530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945593895825