Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217635.1_202017-07-13] 398 sequences; 37,541,693 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq89 378 2e-101 >seq89 Length=614764 Score = 378 bits (418), Expect = 2e-101 Identities = 663/956 (69%), Gaps = 76/956 (8%) Strand=Plus/Plus Query 2 GCAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAA 61 |||| ||||||||||||| || ||||||||| || ||||| |||||||| | ||||| Sbjct 84540 GCAGGTCAAGGCAAAGATTCTAGAGCGTATGCAAGAGTGGACTGAGATGTTTTCAAGTAA 84599 Query 62 CCCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGA 121 ||| || | |||||||||||||| || || |||| | | |||||||| ||| || Sbjct 84600 CCCAGACTTCGGCATCATGGAGCAAGCATACATGAAGTTAAAGACACAGAGTAAGT---- 84655 Query 122 TCAACTCTGGTTCGTTG----GGAGCACTGA---CCAACGTGTT------GTAGACCCTA 168 || | ||| |||| | || ||| | | ||||| | |||||||| | Sbjct 84656 -CACCGATGGAGAGTTGCATTGAAGGACTCATTACTAACGTTCTAATCGCGTAGACCCGA 84714 Query 169 ACCTGCGACCTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGG 228 |||||| || || || || || |||||| |||| |||||| |||| |||||||||| Sbjct 84715 ACCTGCAGCCCCCTTCAAAGCCCGTGAAGACAGAGATAACGGACGCGGATCGCCAGAAGG 84774 Query 229 AAGAGGAGGAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAAA--------GCGGGAC 280 |||| ||||| | || ||||||||||| ||||| | | |||| | || | Sbjct 84775 AAGAAGAGGAATTGCAAATGGCGCTGGCGCTCTCGATTAGAGAAAAGAATCCTGTGGCTC 84834 Query 281 C-GAGCCAT--CCGCCGCCAGGTCCAACCAGCCGCAAGCAAAAGCCCCACAACAATCCGC 337 | |||||| ||| | || || | ||||| || ||||| || Sbjct 84835 CTGAGCCACAGCCGGAGTCAAGTACTTCCAGC-----GCT---GCCCCTG------CCAG 84880 Query 338 CCCGGAACAAG----AGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCT 393 || || ||||| |||| ||||| || || | ||||| ||| | || || || |||| Sbjct 84881 CCAGGCACAAGCCCCAGCA-CATCAGGCGGTTCCTTCTGGTACCTCTGCTGCCACTGTCT 84939 Query 394 CCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCA 453 | || || | || || || |||||| ||| || ||||| ||||| | || |||| Sbjct 84940 CACGAGTCAGGGCGCTCTATGACTTCCAGCCTTCAGAACCAGGCGAACTACAATTTCGCA 84999 Query 454 AAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGC 513 ||||||| | |||||||| |||||||| ||||| ||||| ||||||||||| ||||| Sbjct 85000 GAGGCGACGTCATTGCGGTGCTCGAGTCCGTGTATAAGGATTGGTGGAAGGGCTCTCTAA 85059 Query 514 GTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGG 573 | || || || ||||||||||||||||||||||| || ||||| | || || || | Sbjct 85060 GAGGGCAAACAGGCATCTTCCCCCTCAACTATGTTGAAAAGCTACCTGACCCCACAGTTG 85119 Query 574 AGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGG 633 | ||| | || | |||||||||||||| | || || || | |||| |||||||| | Sbjct 85120 AAGAGTTACAGCGCGAAGCTCAGATGGAAGGCGAGGTGTTCGGCCAGATAAAGAACGTTG 85179 Query 634 AGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGTGCCG------ACGCTAGGGACAATG 687 ||||||| | | || || ||||| || ||| ||| ||| | ||| |||| Sbjct 85180 AGAAGCTATTGACACTCCTCAGCACGCGT---AGTACCGAACTAAACGTTCAGGATAATG 85236 Query 688 AGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCA 747 |||| ||||| | ||||||||| || || | || || || ||| |||| ||||||| Sbjct 85237 AGGAAATCACGGCCCTGTACCACTCCACTTTGGCAATTCGACCTAAGCTGATTGAGCTCA 85296 Query 748 TTGGCAAGTATTCGCAAAAGAAGGGTA-----AGTGGAATCTTTTACGCGAATTT--GTG 800 | ||||| ||||| || || || |||| ||||| | |||| ||| || Sbjct 85297 TCGGCAAATATTCTCAGAAAAAAGGTATAATCGCTGGAAAC---TACG----TTTCAGTT 85349 Query 801 TGTTGGCCACTGAT-CGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAG 859 ||| | ||||| ||| || |||||| ||||| || ||||| ||||||||||| || Sbjct 85350 CGTTAG---CTGATGCGT-ATCAAGATGAATTCACCCAACTCAATGAGAAGTTCATTAAA 85405 Query 860 GCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915 || | || ||||| ||| | ||||| || || || |||||||| || || ||||| Sbjct 85406 GCGAGACGGGACTATGAATCTCTCCTGGAGGCATCCATGTCGCACCCCGCCCAGCC 85461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945530586810