Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234985.1_202017-07-28] 889 sequences; 28,231,324 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq159 383 5e-103 >seq159 Length=39910 Score = 383 bits (424), Expect = 5e-103 Identities = 666/950 (70%), Gaps = 49/950 (5%) Strand=Plus/Minus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 |||| ||||||| | ||||| ||| || ||| || |||||||||| | ||||||| Sbjct 22595 TCAAACCAAAGATTTTGGAGCGCATGCAGGAGTGGGCGCAGATGTTCGCTAACAACCCTG 22536 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTG-------CGTGT 119 || | || ||||||||||||||||| |||| | | ||||| || ||| || | Sbjct 22535 ATTTCGGAATCATGGAGCAGGCCTACATGAAGTTGAAGACGCAGAGTAAGGCTCACGGGA 22476 Query 120 GATCAACTCTGGTTC-GTTGGGAGCACTGACCAACGTGTTGT-AGACCCTAACCTGCGAC 177 | |||| |||| | | || || ||||| | | | || | ||| || ||||| | | Sbjct 22475 CACCAACGCTGGCTATGATGCAAGGACTGATCT-CTTTTTCTCAGATCCCAACCTACAGC 22417 Query 178 CTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGG 237 ||||||| ||||| ||| |||| || || | || || ||||||||||| || | Sbjct 22416 CTCCGTCTAAACCCGGGAAACGAGAGATTACAGAGGCAGATCGGCAGAAGGAAGAAGAAG 22357 Query 238 AGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAAAGCGGGACCGAGCCATCCGCCGCCA 297 | || |||||||||||||| || ||| ||| ||||| ||| ||| || | || Sbjct 22356 AACTGCAGATGGCGCTGGCTCTTTCCATCAGGGAAAA----ACCCAGCG---CGGCCCCT 22304 Query 298 GGTCC--AACCAGCCGCAAGCAAAA--GCCCCACAACAATCCGCC--CCGGAACAAGA-- 349 | || || | | |||||| | | | ||| | ||| || || | ||| Sbjct 22303 GAGCCTAAAGCGGAACCAAGCACTTCTGTCTCCGAAC---CGGCCAGCCAGACCCAGACA 22247 Query 350 GCAGCATC--AAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCC 407 || |||| |||| | | | || || | ||||||||||||||||| || | || Sbjct 22246 GCGACATCGCAAGCGGTACCGCCAGGTACTTCCGCAGCTACCGTCTCCCGGGTCAGAGCT 22187 Query 408 CTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATT 467 | | ||||||| ||| || ||||| || || || ||| | ||||| ||||||||| Sbjct 22186 TTGTTCGACTTCCAGCCTTCCGAACCGGGTGAATTACAATTCAGGAAAGGGGACATTATT 22127 Query 468 GCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGC 527 ||||| || ||||| ||||||||||||||||||||||| || | | || || || || Sbjct 22126 GCGGTGCTTGAGTCCGTGTACAAGGACTGGTGGAAGGGCTCCTTAAGGGGCCAAACTGGG 22067 Query 528 ATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGA 587 || ||||| || ||||| || ||||| |||| ||||| || || ||||| ||||| Sbjct 22066 ATTTTCCCTCTGAACTACGTGGAGAAACTGCCAGATCCAACGGTAGAAGAGCTGCAGAGA 22007 Query 588 GAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCT 647 ||||| || |||||||||||||| |||| | | |||||||| ||||||||||| || | Sbjct 22006 GAAGCCCAAATGGAGGCGGAAGTGTTTGGGCAAATCAAGAATGTGGAGAAGCTTCTTACG 21947 Query 648 CTGCTGAGCAC---TAGTTC-GAG-TGCCGACGCTAGGGACAATGAGGAGATCACTTCGC 702 || ||||||| ||| || ||| || || | ||||| ||||| ||||| || Sbjct 21946 CTTTTGAGCACCCGTAGCTCGGAGTTGAATGTGCAA--GACAACGAGGAAATCACGTCTT 21889 Query 703 TGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGC 762 |||||||| ||| |||| || ||||| |||||||| ||||||||||| |||||||| | Sbjct 21888 TGTACCACTCGACGTTGTCAATTCGGCCCAAGTTGATTGAGCTCATTGGGAAGTATTCTC 21829 Query 763 AAAAGAAGGGTAAGT---GGAATCTTTTACGC--GAATTTGTGTGTTGGCCACTGATCGT 817 ||||||| |||| || ||| ||| |||| | ||||| | | || | Sbjct 21828 AAAAGAAAGGTATGTCAAAGAAGACCCCGCGCTGCAATTCAT---TTGGCTAAT-ATAGA 21773 Query 818 GTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAA 877 | |||||| || ||||||||||| || || |||||||| || || || ||||| ||| Sbjct 21772 TT---AGATGAGTTTACGCAGCTCAATGAAAAATTCATCAAAGCCCGACGAGACTATGAA 21716 Query 878 ACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTACGGTCG 927 | || || ||||| || ||| |||| || || || ||| |||||||| Sbjct 21715 TCTCTACTGGAAGCATCCATGGCGCACCCTGCACAACCCCAGTACGGTCG 21666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945444953955