Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq7 360 6e-96 >seq7 Length=1870902 Score = 360 bits (398), Expect = 6e-96 Identities = 656/944 (69%), Gaps = 51/944 (5%) Strand=Plus/Minus Query 3 CAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAAC 62 ||| ||||| | |||||||| || || ||| ||||||||||||||||||||||||||| Sbjct 1102445 CAGGTCAAGTCGAAGATCCTAGAACGCATGCAGGAATGGACGGAGATGTTCGCCAGTAAC 1102386 Query 63 CCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTG--TG 120 || ||| | || |||||||| || || || |||| ||||||||| || ||| | | Sbjct 1102385 CCGGATTTCGGAATCATGGAACAAGCATACATGAAGCTTAAGACCCAGAGTAAGATCTTT 1102326 Query 121 ATCAACTCTGGTTCGTTGGGAGCA-CTGACCAACGTGTTGTAGACCCTAACCTGCGACCT 179 | || | ||| | || | ||| | || || | || ||||||| ||||||| ||| Sbjct 1102325 AGCAGTTATGGATAGTGGAGAGAAGCTCACTA-----TTTTAGACCCGAACCTGCAGCCT 1102271 Query 180 CCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAG 239 |||||||| || ||| | ||||| || || || ||||| ||||||||||||||| Sbjct 1102270 CCGTCGAAGCCCGGAAAGCGGGAAATCACCGATTCAGATCGCCAAAAGGAAGAGGAGGAG 1102211 Query 240 CTACAGATGGCGCTGGCACTCTCCGTCAAGGAAAGCGGGACCGAGCCATCCGCCGCCAGG 299 || || ||||| || ||||| || | | |||| | || || ||| || | Sbjct 1102210 CTGCAAATGGCCCTTGCACTGTCGATAAGAGAAAAGGCCACG-----ATT-GCC-CCTGC 1102158 Query 300 TCCAACCAGCCGCAAGCAAAAGCCCCACAACAA-TCC-GCC--CCGGAACAAGA------ 349 |||| ||||| |||| | || ||| | ||| | | || |||| ||| Sbjct 1102157 TCCA--CAGCCCGAAGCCA--GCTCCAGTGCTGCTCCAGTCAACCAGAACCAGACACCTG 1102102 Query 350 --GCAGCATC--AAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCG 405 || | || | || | | || || || | || || || || || ||||| | | Sbjct 1102101 CTGCCACGTCCCAGGCCGTCCCCTCGGGTACTTCTGCCGCCACAGTTTCGCGCGTCAGAG 1102042 Query 406 CCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTA 465 || | | |||||| |||||| |||||||| || || |||||||| || || | | Sbjct 1102041 CCTTGTTCGACTTTCAGCCCTCAGAACCCGGTGAACTGCAGTTCCGCAAGGGAGATGTCA 1101982 Query 466 TTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCG 525 | || || ||||||||||| |||||||| |||||||||||||| || | || ||||||| Sbjct 1101981 TCGCTGTCCTCGAGTCTGTCTACAAGGATTGGTGGAAGGGTTCCTTGAGAGGCCAGACCG 1101922 Query 526 GCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGA 585 ||||||| || |||||||| |||||||| || | || || || ||||||| | || Sbjct 1101921 GCATCTTTCCTCTCAACTACGTCGAGAAACTCCCTGACCCGACGGTGGAGGAGTTGCAGC 1101862 Query 586 GAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAG 645 | |||||||||||||| || || || |||| ||||||||||||| |||||| || | Sbjct 1101861 GGGAAGCTCAGATGGAAGCCGATGTGTTTGGTCAGATCAAGAACGTTGAGAAGTTGTTGA 1101802 Query 646 CTCTGCTGAGCACT---AGTTCGAGTGCCG-ACGCTAGGGACAATGAGGAGATCACTTCG 701 | || |||||||| || || | || | | | |||||||||||||||||| | Sbjct 1101801 CCCTTTTGAGCACTCGCAGCTC-CGAGCTGAATGTGCAGGACAATGAGGAGATCACGGCA 1101743 Query 702 CTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCG 761 |||||||| ||| || | || || || ||| |||| ||||||||||| ||||| ||| Sbjct 1101742 TTGTACCACTCCACATTGGCCATTCGCCCCAAGCTGATTGAGCTCATTGGGAAGTACTCG 1101683 Query 762 CAAAAGAAGGGTAAG---TGGAATCTTTTACGCGAATTTGTGTGT------TGGCCACTG 812 || |||||||||||| || || | || | ||| | | | | || || Sbjct 1101682 CAGAAGAAGGGTAAGATTCCGACACTCTAACTC---TTTTTCTATCCTTCCTCTCCGCTA 1101626 Query 813 ATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACT 872 || | | |||| || ||||| |||||||| || ||||| || ||||| || | || | Sbjct 1101625 ATACT-ATGCAGACGAGTTCACACAGCTCAATGAAAAGTTTATTAAGGCGCGGAGGGATT 1101567 Query 873 ACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCC 916 |||| | || || || || || ||| |||| || || || ||| Sbjct 1101566 ACGAGTCTCTGCTGGAGGCGTCCATGGCGCACCCCGCACAACCC 1101523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945483323055