Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq300 383 5e-103 >seq300 Length=1499748 Score = 383 bits (424), Expect = 5e-103 Identities = 655/929 (71%), Gaps = 41/929 (4%) Strand=Plus/Plus Query 3 CAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAAC 62 ||| ||||| | |||||||| || || ||| ||||||||||||||||||||||||||| Sbjct 729955 CAGGTCAAGTCGAAGATCCTAGAACGCATGCAAGAATGGACGGAGATGTTCGCCAGTAAC 730014 Query 63 CCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGT--GTG 120 || ||| | || |||||||| || || || |||| ||| ||||| || ||| | || Sbjct 730015 CCAGATTTCGGAATCATGGAACAAGCATACATGAAGCTGAAGACTCAGAGTAAGATCGTT 730074 Query 121 ATCAACTCTGGTTCGTTGG-GAGCACTGACCAACGTGTTGTAGACCCTAACCTGCGACCT 179 | || || || | |||| ||| | || || | | ||||||| ||||||| || Sbjct 730075 AGCAGCTATGAAT-GTTGAAGAGAA---ACTCAC-TATCTTAGACCCGAACCTGCAGCCA 730129 Query 180 CCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAG 239 ||||| || || |||| | || || || | || ||||| ||||||||||||||| Sbjct 730130 CCGTCCAAGCCCGGGAAGCGGGAAATTACCGATGCAGATCGCCAAAAGGAAGAGGAGGAG 730189 Query 240 CTACAGATGGCGCTGGCACTCTCCGTCA-AGGAAAG--CGGGACCGAGCCATCCGCCGCC 296 || || ||||| || |||||||| | | || |||| | || || || | |||| | Sbjct 730190 CTGCAAATGGCCCTCGCACTCTCGATAAGAGAAAAGGCCACGATCGCCCC-TGCGCCACA 730248 Query 297 AGGTCCAACCAGCCGCAAGCAAAAGCCCCA--CAACAATCCGCCCCGGAACAAGA-GCAG 353 | | | ||||| || || || ||| |||| | | || || || | || Sbjct 730249 GGCTGAAGCCAGCTCCA-GCGCT-GCTCCAGTCAACCAAAC--CCAGGCACCTGCTGCCA 730304 Query 354 CATC--AAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTT 411 | || |||| | | || || || | || || || || || ||||| | ||||| | Sbjct 730305 CCTCCCAAGCAGTCCCGTCGGGTACTTCTGCCGCCACAGTGTCGCGCGTGAGAGCCCTGT 730364 Query 412 ACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGG 471 |||||| ||| || |||||||| || ||| |||||||| || || | || || | Sbjct 730365 TCGACTTTCAGCCTTCAGAACCCGGTGAATTGCAGTTCCGCAAGGGAGATGTCATCGCTG 730424 Query 472 TTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCT 531 | |||||||| || |||||||| |||||||||||||| || | || ||||||||||||| Sbjct 730425 TCCTCGAGTCCGTCTACAAGGATTGGTGGAAGGGTTCCTTGAGAGGCCAGACCGGCATCT 730484 Query 532 TCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAG 591 ||||||| ||||| || ||||| || | || || || ||||||| | || | |||| Sbjct 730485 TCCCCCTTAACTACGTTGAGAAACTTCCTGACCCGACGGTGGAGGAGTTGCAGCGGGAAG 730544 Query 592 CTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGC 651 | |||||||| || || || || | |||| ||||| ||||| |||||| | |||| | Sbjct 730545 CCCAGATGGAAGCCGATGTTTTCGGTCAGATTAAGAATGTGGAAAAGCTGTTGACTCTTC 730604 Query 652 TGAGCACTAGTTCGAGTGCCGACGCT-------AGGGACAATGAGGAGATCACTTCGCTG 704 |||||||| | ||| |||| ||| ||||||||| || ||||| | ||| Sbjct 730605 TGAGCACTCG---GAGCTCCGA-GCTGAATGTGCAGGACAATGAAGAAATCACGGCCCTG 730660 Query 705 TACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAA 764 || ||| ||| || | || || || |||||||| ||||||||||| || || ||||| Sbjct 730661 TATCACTCTACATTGGCCATTCGCCCCAAGTTGATTGAGCTCATTGGGAAATACTCGCAG 730720 Query 765 AAGAAGGGTAAGTGGAATCTTTTACGCGA-ATTTGTGTGTTGGCCACTGATCGTGTTCCA 823 || ||||||||| || ||| ||| || | | || || || || | || || Sbjct 730721 AAAAAGGGTAAGATGA---TTT----CGACATGTCGCTATTCTCCGCTAAT-GCTTTGCA 730772 Query 824 GATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTC 883 || || |||||||||||||||||||||||||||||||| || | || ||||| | || Sbjct 730773 GACGAGTTCACGCAGCTCAACGAGAAGTTCATCAAGGCGCGGAGAGATTACGAGTCTCTG 730832 Query 884 CTTGAAGCCTCGATGTCGCAACCAGCGCA 912 || || || || ||| |||| ||||| || Sbjct 730833 CTGGAGGCGTCCATGGCGCACCCAGCACA 730861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945545934450