Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq287 387 4e-104 >seq287 Length=562341 Score = 387 bits (428), Expect = 4e-104 Identities = 656/929 (71%), Gaps = 41/929 (4%) Strand=Plus/Plus Query 3 CAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAAC 62 ||| ||||| | |||||||| || || ||| ||||||||||||||||||||||||||| Sbjct 483921 CAGGTCAAGTCGAAGATCCTAGAACGCATGCAAGAATGGACGGAGATGTTCGCCAGTAAC 483980 Query 63 CCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGT--GTG 120 || ||| | || |||||||| || || || |||| ||| ||||| || ||| | || Sbjct 483981 CCAGATTTCGGAATCATGGAACAAGCATACATGAAGCTGAAGACTCAGAGTAAGATCGTT 484040 Query 121 ATCAACTCTGGTTCGTTGG-GAGCACTGACCAACGTGTTGTAGACCCTAACCTGCGACCT 179 | || || || | ||||| ||| | || || | | ||||||| ||||||| || Sbjct 484041 AGCAGCTATGAAT-GTTGGAGAGAA---ACTCAC-TATCTTAGACCCGAACCTGCAGCCA 484095 Query 180 CCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAG 239 ||||| || || |||| | || || || | || ||||| ||||||||||||||| Sbjct 484096 CCGTCCAAGCCCTGGAAGCGGGAAATTACCGATGCAGATCGCCAAAAGGAAGAGGAGGAG 484155 Query 240 CTACAGATGGCGCTGGCACTCTCCGTCA-AGGAAAG--CGGGACCGAGCCATCCGCCGCC 296 || || ||||| || |||||||| | | || |||| | || || || | |||| | Sbjct 484156 CTGCAAATGGCCCTCGCACTCTCGATAAGAGAAAAGGCCACGATCGCCCC-TGCGCCACA 484214 Query 297 AGGTCCAACCAGCCGCAAGCAAAAGCCCCA--CAACAATCCGCCCCGGAACAAGA-GCAG 353 | | | ||||| || || || ||| |||| | | || || || | || Sbjct 484215 GGCTGAAGCCAGCTCCA-GCGCT-GCTCCAGTCAACCAAAC--CCAGGCACCTGCTGCCA 484270 Query 354 CATC--AAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTT 411 | || |||| | | || || || | || || || || || ||||| | ||||| | Sbjct 484271 CCTCCCAAGCAGTCCCGTCGGGTACTTCTGCCGCCACAGTGTCGCGCGTGAGAGCCCTGT 484330 Query 412 ACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGG 471 |||||| ||| || |||||||| || ||| |||||||| || || | || || | Sbjct 484331 TCGACTTTCAGCCTTCAGAACCCGGTGAATTGCAGTTCCGCAAGGGAGATGTCATCGCTG 484390 Query 472 TTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCT 531 | |||||||| || |||||||| |||||||||||||| || | || ||||||||||||| Sbjct 484391 TCCTCGAGTCCGTCTACAAGGATTGGTGGAAGGGTTCCTTGAGAGGCCAGACCGGCATCT 484450 Query 532 TCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAG 591 ||||||| ||||| || ||||| || | || || || ||||||| | || | |||| Sbjct 484451 TCCCCCTTAACTACGTTGAGAAACTTCCTGACCCGACGGTGGAGGAGTTGCAGCGGGAAG 484510 Query 592 CTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGC 651 | |||||||| || || || || | |||| ||||| ||||| |||||| | |||| | Sbjct 484511 CCCAGATGGAAGCCGATGTTTTCGGTCAGATTAAGAATGTGGAAAAGCTGTTGACTCTTC 484570 Query 652 TGAGCACTAGTTCGAGTGCCGACGCT-------AGGGACAATGAGGAGATCACTTCGCTG 704 |||||||| | ||| |||| ||| ||||||||| || ||||| | ||| Sbjct 484571 TGAGCACTCG---GAGCTCCGA-GCTGAATGTGCAGGACAATGAAGAAATCACGGCCCTG 484626 Query 705 TACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAA 764 || ||| ||| || | || || || |||||||| ||||||||||| || || ||||| Sbjct 484627 TATCACTCTACATTGGCCATTCGCCCCAAGTTGATTGAGCTCATTGGGAAATACTCGCAG 484686 Query 765 AAGAAGGGTAAGTGGAATCTTTTACGCGA-ATTTGTGTGTTGGCCACTGATCGTGTTCCA 823 || ||||||||| || ||| ||| || | | || || || || | || || Sbjct 484687 AAAAAGGGTAAGATGA---TTT----CGACATGTCGCTATTCTCCGCTAAT-GCTTTGCA 484738 Query 824 GATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTC 883 || || |||||||||||||||||||||||||||||||| || | || ||||| | || Sbjct 484739 GACGAGTTCACGCAGCTCAACGAGAAGTTCATCAAGGCGCGGAGAGATTACGAGTCTCTG 484798 Query 884 CTTGAAGCCTCGATGTCGCAACCAGCGCA 912 || || || || ||| |||| ||||| || Sbjct 484799 CTGGAGGCGTCCATGGCGCACCCAGCACA 484827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945544364805