Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq14 387 4e-104 >seq14 Length=4132392 Score = 387 bits (428), Expect = 4e-104 Identities = 656/929 (71%), Gaps = 41/929 (4%) Strand=Plus/Plus Query 3 CAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAAC 62 ||| ||||| | |||||||| || || ||| ||||||||||||||||||||||||||| Sbjct 3016581 CAGGTCAAGTCGAAGATCCTAGAACGCATGCAAGAATGGACGGAGATGTTCGCCAGTAAC 3016640 Query 63 CCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGT--GTG 120 || ||| | || |||||||| || || || |||| ||| ||||| || ||| | || Sbjct 3016641 CCAGATTTCGGAATCATGGAACAAGCATACATGAAGCTGAAGACTCAGAGTAAGATCGTT 3016700 Query 121 ATCAACTCTGGTTCGTTGG-GAGCACTGACCAACGTGTTGTAGACCCTAACCTGCGACCT 179 | || || || | ||||| ||| | || || | | ||||||| ||||||| || Sbjct 3016701 AGCAGCTATGAAT-GTTGGAGAGAA---ACTCAC-TATCTTAGACCCGAACCTGCAGCCA 3016755 Query 180 CCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAG 239 ||||| || || |||| | || || || | || ||||| ||||||||||||||| Sbjct 3016756 CCGTCCAAGCCCTGGAAGCGGGAAATTACCGATGCAGATCGCCAAAAGGAAGAGGAGGAG 3016815 Query 240 CTACAGATGGCGCTGGCACTCTCCGTCA-AGGAAAG--CGGGACCGAGCCATCCGCCGCC 296 || || ||||| || |||||||| | | || |||| | || || || | |||| | Sbjct 3016816 CTGCAAATGGCCCTCGCACTCTCGATAAGAGAAAAGGCCACGATCGCCCC-TGCGCCACA 3016874 Query 297 AGGTCCAACCAGCCGCAAGCAAAAGCCCCA--CAACAATCCGCCCCGGAACAAGA-GCAG 353 | | | ||||| || || || ||| |||| | | || || || | || Sbjct 3016875 GGCTGAAGCCAGCTCCA-GCGCT-GCTCCAGTCAACCAAAC--CCAGGCACCTGCTGCCA 3016930 Query 354 CATC--AAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTT 411 | || |||| | | || || || | || || || || || ||||| | ||||| | Sbjct 3016931 CCTCCCAAGCAGTCCCGTCGGGTACTTCTGCCGCCACAGTGTCGCGCGTGAGAGCCCTGT 3016990 Query 412 ACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGG 471 |||||| ||| || |||||||| || ||| |||||||| || || | || || | Sbjct 3016991 TCGACTTTCAGCCTTCAGAACCCGGTGAATTGCAGTTCCGCAAGGGAGATGTCATCGCTG 3017050 Query 472 TTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCT 531 | |||||||| || |||||||| |||||||||||||| || | || ||||||||||||| Sbjct 3017051 TCCTCGAGTCCGTCTACAAGGATTGGTGGAAGGGTTCCTTGAGAGGCCAGACCGGCATCT 3017110 Query 532 TCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAG 591 ||||||| ||||| || ||||| || | || || || ||||||| | || | |||| Sbjct 3017111 TCCCCCTTAACTACGTTGAGAAACTTCCTGACCCGACGGTGGAGGAGTTGCAGCGGGAAG 3017170 Query 592 CTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGC 651 | |||||||| || || || || | |||| ||||| ||||| |||||| | |||| | Sbjct 3017171 CCCAGATGGAAGCCGATGTTTTCGGTCAGATTAAGAATGTGGAAAAGCTGTTGACTCTTC 3017230 Query 652 TGAGCACTAGTTCGAGTGCCGACGCT-------AGGGACAATGAGGAGATCACTTCGCTG 704 |||||||| | ||| |||| ||| ||||||||| || ||||| | ||| Sbjct 3017231 TGAGCACTCG---GAGCTCCGA-GCTGAATGTGCAGGACAATGAAGAAATCACGGCCCTG 3017286 Query 705 TACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAA 764 || ||| ||| || | || || || |||||||| ||||||||||| || || ||||| Sbjct 3017287 TATCACTCTACATTGGCCATTCGCCCCAAGTTGATTGAGCTCATTGGGAAATACTCGCAG 3017346 Query 765 AAGAAGGGTAAGTGGAATCTTTTACGCGA-ATTTGTGTGTTGGCCACTGATCGTGTTCCA 823 || ||||||||| || ||| ||| || | | || || || || | || || Sbjct 3017347 AAAAAGGGTAAGATGA---TTT----CGACATGTCGCTATTCTCCGCTAAT-GCTTTGCA 3017398 Query 824 GATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTC 883 || || |||||||||||||||||||||||||||||||| || | || ||||| | || Sbjct 3017399 GACGAGTTCACGCAGCTCAACGAGAAGTTCATCAAGGCGCGGAGAGATTACGAGTCTCTG 3017458 Query 884 CTTGAAGCCTCGATGTCGCAACCAGCGCA 912 || || || || ||| |||| ||||| || Sbjct 3017459 CTGGAGGCGTCCATGGCGCACCCAGCACA 3017487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945594767850